RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 Q6ZS46 218 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ANGPTL5Q86XS5 388 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ASCC1Q8N9N2 400 aaKnown RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 TRMT10AQ8TBZ6 339 aaKnown RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 SGCDQ92629 289 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ASB9Q96DX5 294 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ABCB10Q9NRK6 738 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 NUFIP1Q9UHK0 495 aaKnown RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 TCF19Q9Y242 345 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 A0A1W2PRX2 142 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 ACOD1A6NK06 481 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 LOC110117498-PIK3R3F6TDL0 507 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 PEX14O75381 377 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 DHRS3O75911 302 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 ATP6V1B1P15313 513 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 DLX6P56179 175 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 EDDM3BP56851 147 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 COL10A1Q03692 680 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 DYNC1I2Q13409 638 aaKnown RBP10.2□□□□□ -0.78
SKA1-205ENST00000494518 CNN3Q15417 329 aaKnown RBP10.2□□□□□ -0.78
SKA1-205ENST00000494518 ODF4Q2M2E3 257 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 CLVS2Q5SYC1 327 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 BCL2L15Q5TBC7 163 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 LCN1P1Q5VSP4 162 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 KRT74Q7RTS7 529 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 ZNF573Q86YE8 665 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 CALHM1Q8IU99 346 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 ZNF679Q8IYX0 411 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 OR4S1Q8NGB4 309 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 NRIP2Q9BQI9 281 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 THTPAQ9BU02 230 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 CDCA4Q9BXL8 241 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 SLC25A19Q9HC21 320 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 DNAH9Q9NYC9 4486 aa10.2□□□□□ -0.78
SKA1-205ENST00000494518 KMT2CQ8NEZ4 4911 aaKnown RBP10.19□□□□□ -0.78
SKA1-205ENST00000494518 hCG_1809904A0A1W2PP81 198 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 A0A1W2PPE2 198 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 FAM230AA0A1W2PPH8 454 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 A0A1W2PR64 198 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 A0A1W2PRV1 198 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 PQLC2LA1A4F0 135 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 A6NDX4 124 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 FAM90A8PA6NJQ4 464 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 ADARB2-AS1A8MUL3 147 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 F8VVB4 439 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 F8VWA3 439 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 PRKYO43930 277 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 SRSF10O75494 262 aaKnown RBP10.19□□□□□ -0.78
SKA1-205ENST00000494518 T-ENOLP0DO92 83 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 ROM1Q03395 351 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 GK3PQ14409 553 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 EDDM3AQ14507 147 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 DEGS2Q6QHC5 323 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 ZNF322Q6U7Q0 402 aaPredicted RBP10.19□□□□□ -0.78
SKA1-205ENST00000494518 SPATA24Q86W54 205 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 RPS4Y2Q8TD47 263 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 PHF21AQ96BD5 680 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 CNN2Q99439 309 aaKnown RBP10.19□□□□□ -0.78
SKA1-205ENST00000494518 HES4Q9HCC6 221 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 AURKAIP1Q9NWT8 199 aaPredicted RBP10.19□□□□□ -0.78
SKA1-205ENST00000494518 OR52A1Q9UKL2 312 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 SLC22A13Q9Y226 551 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 POLDIP2Q9Y2S7 368 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
SKA1-205ENST00000494518 COL7A1Q02388 2944 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 A0A1B0GTI1 187 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 C17orf98A8MV24 154 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 ODF3BA8MYP8 253 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 F2RL2O00254 374 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 XPNPEP2O43895 674 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 NOS1APO75052 506 aaPredicted RBP10.18□□□□□ -0.78
SKA1-205ENST00000494518 ZNF254O75437 659 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 RPP14O95059 124 aaKnown RBP10.18□□□□□ -0.78
SKA1-205ENST00000494518 ZNF728P0DKX0 622 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 CALB2P22676 271 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 CXCR4P61073 352 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 BLCAPP62952 87 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 CBX1P83916 185 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 TMEM42Q69YG0 159 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 TCF23Q7RTU1 214 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 REC114Q7Z4M0 266 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 SLC35F2Q8IXU6 374 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 TPRX1Q8N7U7 411 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 OR13D1Q8NGV5 346 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 OR14K1Q8NGZ2 314 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 ASB17Q8WXJ9 295 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 SLAMF9Q96A28 289 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
SKA1-205ENST00000494518 TBX5Q99593 518 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 TEX12Q9BXU0 123 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 CADM1Q9BY67 442 aaKnown RBP10.18□□□□□ -0.78
SKA1-205ENST00000494518 PRSS22Q9GZN4 317 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 NECAP2Q9NVZ3 263 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 IL36RNQ9UBH0 155 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
SKA1-205ENST00000494518 TMEM14AQ9Y6G1 99 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms