RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PARP11Q9NR21 331 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 UQCC1Q9NVA1 299 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 GHRLQ9UBU3 117 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 GTF2A1LQ9UNN4 478 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 VSIG4Q9Y279 399 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 USF3Q68DE3 2245 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 PINLYPA6NC86 204 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 TO15178 435 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 IGHG3P01860 377 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 CXCR1P25024 350 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 FPR2P25090 351 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 ADH6P28332 368 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 DAP3P51398 398 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 ATP1B3P54709 279 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 F2RL1P55085 397 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 MLF1P58340 268 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 SLC26A5P58743 744 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 EGR4Q05215 589 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 PEA15Q15121 130 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF529Q6P280 563 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 PEG10Q86TG7 708 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 OR8S1Q8NH09 359 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 DOCK7Q96N67 2140 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 NRIP2Q9BQI9 281 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF251Q9BRH9 671 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 CST11Q9H112 138 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 DEFB127Q9H1M4 99 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 WDR13Q9H1Z4 485 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 SEC61A2Q9H9S3 476 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 TAS2R4Q9NYW5 299 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 RCC2Q9P258 522 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF346Q9UL40 294 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 LRP12Q9Y561 859 aa9.24□□□□□ -0.93
PDLIM1-205ENST00000493949 LOC107986453A0A1B0GWG9 222 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR6C76A6NM76 312 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 A8MVM7 634 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ALG1L2C9J202 215 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 RAB27BO00194 218 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 PSMD9O00233 223 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 GPR31O00270 319 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 DCTN6O00399 190 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 NUPL2O15504 423 aaKnown RBP9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 FADS1O60427 444 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 NPIPB7O75200 414 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 UTS2O95399 124 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 SFT2D2O95562 160 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 CNOT4O95628 575 aaKnown RBP9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 SULT1A2P50226 295 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 POLR2HP52434 150 aaKnown RBP9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 SUMO3P55854 103 aaPredicted RBP9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 TAS2R46P59540 309 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 SCGB2B2Q4G0G5 96 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 FAM74A1Q5RGS3 127 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 C1orf185Q5T7R7 199 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ASPHD2Q6ICH7 369 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 TRAPPC6BQ86SZ2 158 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 NAA40Q86UY6 237 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 PLPP5Q8NEB5 264 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR4N2Q8NGD1 307 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR5T3Q8NGG3 340 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR51A4Q8NGJ6 313 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR10AC1Q8NH08 325 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 OR4C3Q8NH37 302 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 TERB2Q8NHR7 220 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF563Q8TA94 476 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 NUBPLQ8TB37 319 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 PHOSPHO1Q8TCT1 267 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 DCUN1D4Q92564 292 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ARL5BQ96KC2 179 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF75AQ96N20 296 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 ABHD6Q9BV23 337 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 FANCFQ9NPI8 374 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 RHBDD3Q9Y3P4 386 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 LIPGQ9Y5X9 500 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 MED12Q93074 2177 aa9.23□□□□□ -0.93
PDLIM1-205ENST00000493949 A0A0G2JMM0 328 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 A0A1W2PPB8 328 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 A0A1W2PRS3 328 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 MBD3L4A6NDZ8 208 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 MBD3L5A6NJ08 208 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 TMEM14DPA8MWL7 114 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 KIR3DP1A8MWS1 328 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 C1orf196B1AJZ1 125 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 M0QYG6 137 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 UBE2CO00762 179 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 AQP7O14520 342 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 FBXO24O75426 580 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 JTBO76095 146 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 CST4P01036 141 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 SPARCP09486 303 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 PGAM2P15259 253 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF823P16415 610 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 ADCYAP1P18509 176 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 MAGEB1P43366 347 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 RAB5CP51148 216 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 AKR1D1P51857 326 aa9.22□□□□□ -0.93
PDLIM1-205ENST00000493949 DVL1P1P54792 670 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms