RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TRAV40A0A0B4J280 105 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 A0A1B0GW55 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 EFCAB10A6NFE3 127 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 RFPL4AA6NLU0 287 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 E9PI62 339 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 RFPL4AL1F8VTS6 287 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 H0YHG0 523 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 H0YJX3 145 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 FCN3O75636 299 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ZFPL1O95159 310 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 VENTXO95231 258 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L2P0CJ85 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L3P0CJ86 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L4P0CJ87 422 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L5P0CJ88 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L6P0CJ89 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L7P0CJ90 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 LIMS3P0CW19 117 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 LIMS4P0CW20 117 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 AZGP1P25311 298 aaKnown RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ETV1P50549 477 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 CAPZA1P52907 286 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 CAV3P56539 151 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ERVK11-1P61568 191 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 SRSF2Q01130 221 aaKnown RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 BLMHQ13867 455 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DGUOKQ16854 277 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 KRTAP24-1Q3LI83 254 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 GPR157Q5UAW9 335 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 RPL22L1Q6P5R6 122 aaKnown RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4L9Q6RFH8 374 aaPredicted RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 FIP1L1Q6UN15 594 aaKnown RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 LHFPL2Q6ZUX7 228 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 SLC25A26Q70HW3 274 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 CALHM1Q8IU99 346 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 PHC2Q8IXK0 858 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 Q8IYB0 196 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ZNRF1Q8ND25 227 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 LY6G5BQ8NDX9 201 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 TMEM185AQ8NFB2 350 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 TBC1D15Q8TC07 691 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 TFAP2CQ92754 450 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 GGHQ92820 318 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 SPSB1Q96BD6 273 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ADAT3Q96EY9 351 aaPredicted RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 SDSLQ96GA7 329 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 CEP19Q96LK0 163 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ZNF488Q96MN9 340 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 PDCD1LG2Q9BQ51 273 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 NRIP2Q9BQI9 281 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DCTN5Q9BTE1 182 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 C19orf24Q9BVV8 132 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ZCCHC4Q9H5U6 513 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 MTCH1Q9NZJ7 389 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 ONECUT1Q9UBC0 465 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DUX4Q9UBX2 424 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 NKX1-2Q9UD57 310 aaPredicted RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 OR14J1Q9UGF5 321 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DIMT1Q9UNQ2 313 aaKnown RBP5.77□□□□□ -1.49
TOP3A-207ENST00000493648 DHDHQ9UQ10 334 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 KPTNQ9Y664 436 aa5.77□□□□□ -1.49
TOP3A-207ENST00000493648 IGKV1-27A0A075B6S5 117 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 IGHV3OR16-10A0A075B7F0 116 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 TRBV23-1A0A0A0MS06 115 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 IGKV1-9A0A0C4DH69 117 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 A0A1W2PPH5 198 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 A0A1W2PQ09 198 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 MAGEB3O15480 346 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 INMTO95050 263 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 ALX3O95076 343 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 PLATP00750 562 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 KNG1P01042 644 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 MT-ND2P03891 347 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 TFF1P04155 84 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 CD2P06729 351 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 SFTPBP07988 381 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 CHRM2P08172 466 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 IGHV4-38-2P0DP08 117 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 PIPP12273 146 aaPredicted RBP5.76□□□□□ -1.49
TOP3A-207ENST00000493648 SELLP14151 372 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 MMP9P14780 707 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 GTF2A1P52655 376 aaPredicted RBP5.76□□□□□ -1.49
TOP3A-207ENST00000493648 ST3GAL4Q11206 333 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 BAMBIQ13145 260 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 OR2G6Q5TZ20 316 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 C1orf122Q6ZSJ8 110 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 C9orf139Q6ZV77 190 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 BCL6BQ8N143 479 aaPredicted RBP5.76□□□□□ -1.49
TOP3A-207ENST00000493648 BATF2Q8N1L9 274 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 FGFRL1Q8N441 504 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 STX19Q8N4C7 294 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 PARP16Q8N5Y8 322 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 CD177Q8N6Q3 437 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 KIR3DL3Q8N743 410 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 SIGLECL1Q8N7X8 197 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 BPIFB6Q8NFQ5 453 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 OR51A4Q8NGJ6 313 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 OR10AC1Q8NH08 325 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 C8orf46Q8TAG6 207 aa5.76□□□□□ -1.49
TOP3A-207ENST00000493648 GPR148Q8TDV2 347 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms