RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 NDUFA2O43678 99 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 CD5LO43866 347 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 SC5DO75845 299 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 RPP14O95059 124 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 LALBAP00709 142 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 WNT2P09544 360 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 IGHV4-31P0DP07 118 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 MUC1P15941 1255 aaPredicted RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 MYL12AP19105 171 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PSMB10P40306 273 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 GZMKP49863 264 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 GBX2P52951 348 aaPredicted RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 CDH15P55291 814 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ERVK11-1P61568 191 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 RPS11P62280 158 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS52-219ENST00000493379 GNG3P63215 75 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PRDX4Q13162 271 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ZMYND11Q15326 602 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 UBE2V2Q15819 145 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ZNF404Q494X3 552 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 RBM48Q5RL73 367 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 OR2G6Q5TZ20 316 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 XAF1Q6GPH4 301 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 CRIP3Q6Q6R5 217 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 WDR82Q6UXN9 313 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 UNQ9370/PRO34162Q6UXP9 181 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ZNF841Q6ZN19 808 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PRSS48Q7RTY5 328 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 FAM220AQ7Z4H9 259 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ZDHHC23Q8IYP9 409 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 RDH10Q8IZV5 341 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 C1orf87Q8N0U7 546 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 KLHL36Q8N4N3 616 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 BPIFB6Q8NFQ5 453 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 OR10AD1Q8NGE0 317 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 CLDND2Q8NHS1 167 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 MYDGFQ969H8 173 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 DACT3Q96B18 629 aaPredicted RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 C12orf43Q96C57 262 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 SMIM19Q96E16 107 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 TIMD4Q96H15 378 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PGLYRP3Q96LB9 341 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 MICU1Q9BPX6 476 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ADAT1Q9BUB4 502 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 TTTY10Q9BZA0 68 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 CHST5Q9GZS9 411 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 FN3KRPQ9HA64 309 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PATZ1Q9HBE1 687 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 DCAF16Q9NXF7 216 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 SCN3BQ9NY72 215 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 UBAP1Q9NZ09 502 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 RNF7Q9UBF6 113 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 HHLA2Q9UM44 414 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PIGLQ9Y2B2 252 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 TPRKBQ9Y3C4 175 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 N6AMT1Q9Y5N5 214 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 TRBV2A0A0J9YWF9 115 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 A0A1B0GVI7 797 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 LOC107986453A0A1B0GWG9 222 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 LRP5LA4QPB2 252 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 LRRC30A6NM36 301 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 ANXA2P2A6NMY6 339 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 A8MXK9 166 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 SRRM5B3KS81 715 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 LGALS8O00214 317 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 PPIHO43447 177 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 CDC14BO60729 498 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 IGHV2-5P01817 119 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 AMY1AP04745 511 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 ALDOBP05062 364 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 MDH2P40926 338 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 FUT6P51993 359 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 GTF2A1P52655 376 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 WNT4P56705 351 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 TAS2R43P59537 309 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 BTG1P62324 171 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 PAX2Q02962 417 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 IL24Q13007 206 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 TPBGQ13641 420 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 CYB5R2Q6BCY4 276 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 PEG10Q86TG7 708 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 LYPD6Q86Y78 171 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 FAM90A1Q86YD7 464 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 SERPINA12Q8IW75 414 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 MUC20Q8N307 709 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 STX19Q8N4C7 294 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 SCCPDHQ8NBX0 429 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 Q8NFD4 153 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 OR5AK2Q8NH90 309 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 ZNF420Q8TAQ5 688 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 AQP3Q92482 292 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 PIGCQ92535 297 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 RGP1Q92546 391 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 MSI2Q96DH6 328 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 ADAT3Q96EY9 351 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 RNF170Q96K19 258 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 FAM71F1Q96KD3 344 aaPredicted RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 PDCD1LG2Q9BQ51 273 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 RTL8AQ9BWD3 113 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms