RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 RP2O75695 350 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 PTGFRP43088 359 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 PDLIM4P50479 330 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 ZP1P60852 638 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 IL24Q13007 206 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 P2RY14Q15391 338 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 AWAT2Q6E213 333 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 SFRP4Q6FHJ7 346 aaPredicted RBP14.46□□□□□ -0.09
LIME1-208ENST00000493265 CLEC2AQ6UVW9 174 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 C1QL2Q7Z5L3 287 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 C1orf87Q8N0U7 546 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 DEFB108BQ8NET1 73 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 OR4D6Q8NGJ1 314 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 OR10K1Q8NGX5 313 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 NDNFQ8TB73 568 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 SEH1LQ96EE3 360 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 C18orf12Q96KH6 178 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 CHODLQ9H9P2 273 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 MTCH1Q9NZJ7 389 aa14.46□□□□□ -0.09
LIME1-208ENST00000493265 IGKV1-12A0A0C4DH73 117 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 ISPDA4D126 451 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 DPPA5A6NC42 116 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 IFNL4K9M1U5 179 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 IGKV1D-12P01611 117 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 SLC2A2P11168 524 aaPredicted RBP14.45□□□□□ -0.1
LIME1-208ENST00000493265 BCL3P20749 454 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 GLRA1P23415 457 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 MPZP25189 248 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 RPS19P39019 145 aaKnown RBP14.45□□□□□ -0.1
LIME1-208ENST00000493265 NPBWR2P48146 333 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 TMBIM6P55061 237 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 SNU13P55769 128 aaKnown RBP14.45□□□□□ -0.1
LIME1-208ENST00000493265 CLDN12P56749 244 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 MRPS11P82912 194 aaKnown RBP14.45□□□□□ -0.1
LIME1-208ENST00000493265 RSU1Q15404 277 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 RAB11BQ15907 218 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 GLIPR1L1Q6UWM5 242 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 TPRA1Q86W33 373 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 GCSAMQ8N6F7 178 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 FAM168AQ92567 244 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 ISOC1Q96CN7 298 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 FOXRED1Q96CU9 486 aaPredicted RBP14.45□□□□□ -0.1
LIME1-208ENST00000493265 CEP19Q96LK0 163 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 WDR13Q9H1Z4 485 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 NARFLQ9H6Q4 476 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 TANC2Q9HCD6 1990 aa14.45□□□□□ -0.1
LIME1-208ENST00000493265 F8VVB4 439 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 F8VWA3 439 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 NXPH2O95156 264 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 HTR3BO95264 441 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 INHBBP09529 407 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 PGA5P0DJD9 388 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 HTR2CP28335 458 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 GPR6P46095 362 aaPredicted RBP14.44□□□□□ -0.1
LIME1-208ENST00000493265 PSMD7P51665 324 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 SPCS2Q15005 226 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 CLEC12BQ2HXU8 276 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 ZNF181Q2M3W8 571 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 Q5PR19 223 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 CLEC9AQ6UXN8 241 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 PEG10Q86TG7 708 aaKnown RBP14.44□□□□□ -0.1
LIME1-208ENST00000493265 KRTAP1-3Q8IUG1 177 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 CDH26Q8IXH8 852 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 LRRC75A-AS1Q8N1F1 130 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 POC1AQ8NBT0 407 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 OR10Z1Q8NGY1 313 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 UQCC2Q9BRT2 126 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 METTL9Q9H1A3 318 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 DCSTAMPQ9H295 470 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 KCNK15Q9H427 330 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 MYOZ1Q9NP98 299 aaPredicted RBP14.44□□□□□ -0.1
LIME1-208ENST00000493265 RBFOX1Q9NWB1 397 aaKnown RBP14.44□□□□□ -0.1
LIME1-208ENST00000493265 DNAJB11Q9UBS4 358 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 DAPK2Q9UIK4 370 aa14.44□□□□□ -0.1
LIME1-208ENST00000493265 PPIAL4EA0A075B759 164 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 A0A0B4J203 849 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 PPIAL4DF5H284 164 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 H3BMQ9 156 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 SLC17A2O00624 439 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 PPIAL4FP0DN26 164 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 SERPINA2P20848 420 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 SLC22A6Q4U2R8 563 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 C1orf100Q5SVJ3 147 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 USP43Q70EL4 1123 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 LYPD6Q86Y78 171 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 SAXO1Q8IYX7 474 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 OR5T2Q8NGG2 359 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 OR6M1Q8NGM8 313 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 RAB1CQ92928 201 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 EMG1Q92979 244 aaKnown RBP14.43□□□□□ -0.1
LIME1-208ENST00000493265 C12orf43Q96C57 262 aaKnown RBP14.43□□□□□ -0.1
LIME1-208ENST00000493265 TIMD4Q96H15 378 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 NRIP2Q9BQI9 281 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 PIMREGQ9BSJ6 248 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 WIPI2Q9Y4P8 454 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 PPIAL4AQ9Y536 164 aa14.43□□□□□ -0.1
LIME1-208ENST00000493265 NPTNQ9Y639 398 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms