RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ZNF16P17020 682 aaPredicted RBP11.32□□□□□ -0.6
MSH6-208ENST00000493177 HTR2CP28335 458 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 GZMKP49863 264 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 RORCP51449 518 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 KRTAP1-1Q07627 177 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 P2RY14Q15391 338 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 MPPED2Q15777 294 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 ZNF826PQ6ZT77 177 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 SLC25A26Q70HW3 274 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 BATF2Q8N1L9 274 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 SLC25A46Q96AG3 418 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 DCUN1D5Q9BTE7 237 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 PKIBQ9C010 78 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
MSH6-208ENST00000493177 A0A0G2JK05 382 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 SLC17A2O00624 439 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 SYNGR1O43759 233 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 CDC14BO60729 498 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 SLC2A2P11168 524 aaPredicted RBP11.31□□□□□ -0.6
MSH6-208ENST00000493177 SOX6P35712 828 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 PTGFRP43088 359 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 CLDN12P56749 244 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 ZP1P60852 638 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 GMFBP60983 142 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 PDZK1IP1Q13113 114 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 FAM76BQ5HYJ3 339 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 GLIPR1L1Q6UWM5 242 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 NR2C2APQ86WQ0 139 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 CROCCP3Q8IVE0 287 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 MKXQ8IYA7 352 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 BOLLQ8N9W6 283 aaKnown RBP11.31□□□□□ -0.6
MSH6-208ENST00000493177 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 OR51F2Q8NH61 342 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 ZNF671Q8TAW3 534 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 AQP3Q92482 292 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 ERGIC1Q969X5 290 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 SMURF1Q9HCE7 757 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 STEAP1Q9UHE8 339 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 PPP1R3CQ9UQK1 317 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 POLDIP2Q9Y2S7 368 aa11.31□□□□□ -0.6
MSH6-208ENST00000493177 IGHV1-69-2A0A0G2JMI3 117 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 LRRC30A6NM36 301 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 TRAPPC2LH3BP13 241 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 AIPO00170 330 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 CRLF1O75462 422 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 RHBDL1O75783 438 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 ZNF182P17025 639 aaPredicted RBP11.3□□□□□ -0.6
MSH6-208ENST00000493177 RANBP1P43487 201 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 GATA4P43694 442 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 IL24Q13007 206 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 RIN1Q13671 783 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 RSU1Q15404 277 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 CHRFAM7AQ494W8 412 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 C1orf100Q5SVJ3 147 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
MSH6-208ENST00000493177 DYNC2LI1Q8TCX1 351 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 CCL17Q92583 94 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 HPS1Q92902 700 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 TLNRD1Q9H1K6 362 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 KCNS2Q9ULS6 477 aa11.3□□□□□ -0.6
MSH6-208ENST00000493177 A0A096LNT2 108 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 A0A0B4J203 849 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 AKR7A2O43488 359 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 HTR3BO95264 441 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
MSH6-208ENST00000493177 CYB5R3P00387 301 aaPredicted RBP11.29□□□□□ -0.6
MSH6-208ENST00000493177 IGHV4-31P0DP07 118 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 ARSBP15848 533 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 BCL3P20749 454 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 SERPINA2P20848 420 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 MPZP25189 248 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 PMELP40967 661 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 DGUOKQ16854 277 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 HFEQ30201 348 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 SLC22A6Q4U2R8 563 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 FAM166AQ6J272 317 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 WDR82Q6UXN9 313 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 C1QL2Q7Z5L3 287 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 OR51D1Q8NGF3 324 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 OR10K1Q8NGX5 313 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 AP3S1Q92572 193 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 RDH5Q92781 318 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms