RNA–Protein interactions for RNA: ENST00000493045.1

SMG7-207, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-207ENST00000493045 CCDC12Q8WUD4 166 aaPredicted RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 PDCD6IPQ8WUM4 868 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 ECHDC3Q96DC8 303 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 DNAJC1Q96KC8 554 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 LINC00477Q96M19 166 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 SERPINB12Q96P63 405 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 OR2A5Q96R48 311 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 KCNS3Q9BQ31 491 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 TM6SF2Q9BZW4 377 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 TRIM4Q9C037 500 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 SLC40A1Q9NP59 571 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 PRSS16Q9NQE7 514 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 HEBP1Q9NRV9 189 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 NECAP2Q9NVZ3 263 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 CLN6Q9NWW5 311 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 NKIRAS1Q9NYS0 192 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 STX18Q9P2W9 335 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 RCL1Q9Y2P8 373 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 YARS2Q9Y2Z4 477 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 KCNE3Q9Y6H6 103 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 SPAG17Q6Q759 2223 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
SMG7-207ENST00000493045 PHF3Q92576 2039 aaKnown RBP2.03□□□□□ -2.08
SMG7-207ENST00000493045 SMG1Q96Q15 3661 aaKnown RBP2.03□□□□□ -2.09
SMG7-207ENST00000493045 COL5A1P20908 1838 aaPredicted RBP2.03□□□□□ -2.09
SMG7-207ENST00000493045 DOCK8Q8NF50 2099 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 IGSF9BQ9UPX0 1349 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 C2orf16Q68DN1 1984 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 IGKV1D-13A0A0B4J2D9 117 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 C1orf232A0A0U1RR37 186 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 ZNF816-ZNF321PA0A0X1KG74 233 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 TSPAN11A1L157 253 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SLC22A20A6NK97 555 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 CENPXA8MT69 81 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 F6UB75 175 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 FKBP6O75344 327 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 MYO1DO94832 1006 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 GABARAPO95166 117 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 KLHL2O95198 593 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 OR5F1O95221 314 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 LSM8O95777 96 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 KRT16P08779 473 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 IGHV1-8P0DP01 117 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 IGKV1-13P0DP09 117 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 HSPD1P10809 573 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 GABRR2P28476 465 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 CD52P31358 61 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 HRH1P35367 487 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 CSKP41240 450 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 GDI2P50395 445 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 NCBP2P52298 156 aaKnown RBP eCLIP2.02□□□□□ -2.09
SMG7-207ENST00000493045 UBE2MP61081 183 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 RAB14P61106 215 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 NUTF2P61970 127 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 RPS15AP62244 130 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 YWHAEP62258 255 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 MGAT3Q09327 533 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 EIF4EBP1Q13541 118 aaPredicted RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 CASP8Q14790 479 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 IRF4Q15306 451 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 TSC22D1Q15714 1073 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 VAMP3Q15836 100 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 ZNF726P1Q15940 193 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 UAP1Q16222 522 aaPredicted RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 TRMT5Q32P41 509 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 SAPCD1Q5SSQ6 148 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 THOC7Q6I9Y2 204 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 CLEC18BQ6UXF7 455 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 MBOAT1Q6ZNC8 495 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SLC35D2Q76EJ3 337 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 CDKL3Q8IVW4 592 aaPredicted RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 FAM86B1Q8N7N1 296 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 NOXO1Q8NFA2 376 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 OR5T1Q8NG75 326 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 UBALD1Q8TB05 177 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 NDNFQ8TB73 568 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 LRRC20Q8TCA0 184 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 ISOC2Q96AB3 205 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 FAM131CQ96AQ9 280 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 APH1AQ96BI3 265 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 GALNT14Q96FL9 552 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 CYTH2Q99418 400 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SPIN2AQ99865 258 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SPIN2BQ9BPZ2 258 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SELENOSQ9BQE4 189 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 PLA2G2FQ9BZM2 168 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 OR52A5Q9H2C5 316 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 TMEM38AQ9H6F2 299 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 METTL8Q9H825 291 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 UGT1A7Q9HAW7 530 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 UGT1A8Q9HAW9 530 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 SPACA1Q9HBV2 294 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 ACP6Q9NPH0 428 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 DDX19AQ9NUU7 478 aaKnown RBP2.02□□□□□ -2.09
SMG7-207ENST00000493045 ZNRD1Q9P1U0 126 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 FLVCR2Q9UPI3 526 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 KPTNQ9Y664 436 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 PCNX1Q96RV3 2341 aa2.02□□□□□ -2.09
SMG7-207ENST00000493045 AHCTF1Q8WYP5 2266 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms