RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 KLF14Q8TD94 323 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 DOK4Q8TEW6 326 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 CDKL2Q92772 493 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 TNFRSF14Q92956 283 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 CPB2Q96IY4 423 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 SPACA5Q96QH8 159 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 PRRG3Q9BZD7 231 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 TBL1XR1Q9BZK7 514 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 SLC38A1Q9H2H9 487 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 WDR55Q9H6Y2 383 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 VCX3AQ9NNX9 186 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 ACOT13Q9NPJ3 140 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF302Q9NR11 478 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 SDHAF2Q9NX18 166 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 STK38LQ9Y2H1 464 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 KIAA1671Q9BY89 1806 aa1.47□□□□□ -2.17
HMGB1P30-201ENST00000492455 TICRRQ7Z2Z1 1910 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 LOXHD1Q8IVV2 1947 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 LOC100506127A0A0U1RQW1 187 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 MGAT4DA6NG13 374 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF98A6NK75 572 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 A8MWL6 223 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 C16orf90A8MZG2 172 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 RNF113AO15541 343 aaKnown RBP1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZMPSTE24O75844 475 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 CD8AP01732 235 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR4Q2P0C623 313 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 LCN1P31025 176 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 MPV17P39210 176 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 C2orf80Q0P641 193 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 TRDNQ13061 729 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 GUSBP1Q15486 140 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGFBP7Q16270 282 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 Q3ZCU0 254 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 RESP18Q5W5W9 173 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 FAM104BQ5XKR9 115 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 PRNTQ86SH4 94 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 PDPNQ86YL7 162 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 NELFCDQ8IXH7 590 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 ATPAF2Q8N5M1 289 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR4D6Q8NGJ1 314 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 ORAOV1Q8WV07 137 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 TMIGD2Q96BF3 282 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 METTL26Q96S19 204 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 RHOXF2Q9BQY4 288 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 BEX2Q9BXY8 128 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 MS4A8Q9BY19 250 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 FRMD8P1Q9BZ68 369 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 PORCNQ9H237 461 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 DHX35Q9H5Z1 703 aaKnown RBP1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 C12orf4Q9NQ89 552 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 PRO0628Q9UI54 55 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 RWDD2AQ9UIY3 292 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 ANXA10Q9UJ72 324 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 RAB22AQ9UL26 194 aa1.46□□□□□ -2.18
HMGB1P30-201ENST00000492455 BAZ2AQ9UIF9 1905 aaKnown RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 RAB19A4D1S5 217 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF879B4DU55 563 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 PRAMEF26H0Y7S4 382 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 TCAPO15273 167 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 DHRS3O75911 302 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGLV3-19P01714 112 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 APOA1P02647 267 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 MPIP34949 423 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 RANBP1P43487 201 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 IDH2P48735 452 aaKnown RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 DNASE1L1P49184 302 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 SLC18A1P54219 525 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 RPL10AP62906 217 aaKnown RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 TNNC1P63316 161 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 FAM53BQ14153 422 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 PSG3Q16557 428 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 CEACAM16Q2WEN9 425 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 SPINT4Q6UDR6 99 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 CASP12Q6UXS9 341 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 COPS6Q7L5N1 327 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 CCNYL1Q8N7R7 359 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 SPERTQ8NA61 448 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 SLC26A10Q8NG04 563 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR51Q1Q8NH59 317 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 FAM57AQ8TBR7 257 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 RILPQ96NA2 401 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 QKIQ96PU8 341 aaKnown RBP eCLIP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 COPS4Q9BT78 406 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 MRPL20Q9BYC9 149 aaKnown RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 API5Q9BZZ5 524 aaKnown RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 ASB7Q9H672 318 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 PLEKHA1Q9HB21 404 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 IL37Q9NZH6 218 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 CLEC2DQ9UHP7 191 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 CYB5R1Q9UHQ9 305 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 KLF13Q9Y2Y9 288 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 SIGLEC1Q9BZZ2 1709 aa1.45□□□□□ -2.18
HMGB1P30-201ENST00000492455 DYSFO75923 2080 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ELP1O95163 1332 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 SEC16AO15027 2179 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGKV1D-17A0A075B6S4 117 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF233A6NK53 670 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR2AT4A6NND4 320 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms