RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MOB3CQ70IA8 216 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 OVCH2Q7RTZ1 564 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 LHFPL1Q86WI0 220 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 TMED6Q8WW62 240 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ICE1Q9Y2F5 2266 aa10.8□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF850A8MQ14 1090 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 B4E171 279 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 NRASP01111 189 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 SERPINA7P05543 415 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 CYC1P08574 325 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 TSPAN7P41732 249 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 GFRA1P56159 465 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 FAM3AP98173 230 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 RPUSD3Q6P087 351 aaKnown RBP10.79□□□□□ -0.68
HMGN1-220ENST00000492280 OR52H1Q8NGJ2 320 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 OR1S2Q8NGQ3 325 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 MRPS24Q96EL2 167 aaKnown RBP10.79□□□□□ -0.68
HMGN1-220ENST00000492280 RASL12Q9NYN1 266 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 NOSIPQ9Y314 301 aaKnown RBP10.79□□□□□ -0.68
HMGN1-220ENST00000492280 CACNA1DQ01668 2161 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 A0A0D9SG52 128 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 IGHV3-64DA0A0J9YX35 117 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 OR6C6A6NF89 314 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 SCGB1D2O95969 90 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 DUSP1P28562 367 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 SCRN3Q0VDG4 424 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 PHLDA2Q53GA4 152 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 TMEM185AQ8NFB2 350 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 OR10AD1Q8NGE0 317 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 PAPOLGQ9BWT3 736 aaKnown RBP10.79□□□□□ -0.68
HMGN1-220ENST00000492280 NUP50Q9UKX7 468 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
HMGN1-220ENST00000492280 F8VVB4 439 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 F8VWA3 439 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR2F2O95006 317 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 FGF2P09038 288 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 CST2P09228 141 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SLC25A4P12235 298 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 RCC1P18754 421 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TBPP20226 339 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 RBP2P50120 134 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ARF1P84077 181 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR2F1Q13607 317 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SSPNQ14714 243 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 PEG10Q86TG7 708 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SULF2Q8IWU5 870 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR2M7Q8NG81 312 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SF3B5Q9BWJ5 86 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SMIM3Q9BZL3 60 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TMEM231Q9H6L2 316 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TAS2R3Q9NYW6 316 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 LIPGQ9Y5X9 500 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ARHGAP21Q5T5U3 1957 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 A8MXK9 166 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 HOXD4P09016 255 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 PPIAP62937 165 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SNTB1Q13884 538 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TGIF1Q15583 401 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR1C1Q15619 314 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SMUG1Q53HV7 270 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR2A2Q6IF42 318 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR11L1Q8NGX0 322 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 KCNE4Q8WWG9 221 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 CMSS1Q9BQ75 279 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 NUDT16L1Q9BRJ7 211 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ADAT1Q9BUB4 502 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TM2D1Q9BX74 207 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 PRRG4Q9BZD6 226 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 METTL9Q9H1A3 318 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 C12orf49Q9H741 205 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF703Q9H7S9 590 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SESN1Q9Y6P5 492 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 MRPL33O75394 65 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR7C1O76099 320 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SP9P0CG40 484 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR5H8P0DN80 308 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 TAS2R31P59538 309 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SRSF4Q08170 494 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SLC22A25Q6T423 547 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 SLC25A26Q70HW3 274 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 OR56B2PQ8NGI1 322 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 CPT1CQ8TCG5 803 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 MRPL24Q96A35 216 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 MARVELD3Q96A59 401 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 PARP12Q9H0J9 701 aaKnown RBP10.78□□□□□ -0.68
HMGN1-220ENST00000492280 LHX6Q9UPM6 363 aa10.78□□□□□ -0.68
HMGN1-220ENST00000492280 DMXL2Q8TDJ6 3036 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TEX13DA0A0J9YY54 714 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 C5orf49A4QMS7 147 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 B8ZZF3 427 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 M0R296 226 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 NGFP01138 241 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms