RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PGA3P0DJD8 388 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 FLI1Q01543 452 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 SPOCK1Q08629 439 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ACKR1Q16570 336 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ODF4Q2M2E3 257 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF704Q6ZNC4 412 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 MOB3CQ70IA8 216 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 TMED4Q7Z7H5 227 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 KCNRGQ8N5I3 272 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 TMEM229BQ8NBD8 167 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ASB10Q8WXI3 467 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 DVL3Q92997 716 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 UBTD1Q9HAC8 227 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 CKLFQ9UBR5 152 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 DSCAMO60469 2012 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 SPG11Q96JI7 2443 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 CYB5AP00167 134 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 TGFBR3Q03167 851 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 WDR38Q5JTN6 314 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 LY6G6FQ5SQ64 297 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 GLT8D1Q68CQ7 371 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ATRAIDQ6UW56 229 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 PRSS35Q8N3Z0 413 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 OR5M8Q8NGP6 311 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 SLC25A44Q96H78 314 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 PDCD10Q9BUL8 212 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 MRPL13Q9BYD1 178 aaKnown RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 HEATR1Q9H583 2144 aaKnown RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF107Q9UII5 783 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-219ENST00000491747 PRELID3BQ9Y3B1 194 aa8.12□□□□□ -1.11
BRCA1-219ENST00000491747 SHISA9B4DS77 424 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 H3BSH0 61 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 H7C1C5 153 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 M0R1B8 84 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 BCL2L11O43521 198 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 AMY2AP04746 511 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CD2P06729 351 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CD3EP07766 207 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ACHEP22303 614 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CSNK1A1P48729 337 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 LCN6P62502 163 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 MESTQ5EB52 335 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ELP2Q6IA86 826 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 C11orf87Q6NUJ2 197 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ADAM5Q6NVV9 412 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 UQCC3Q6UW78 93 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 OTOSQ8NHW6 89 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 NARS2Q96I59 477 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ULBP2Q9BZM5 246 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 SYT4Q9H2B2 425 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ESRP2Q9H6T0 727 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 BARX1Q9HBU1 254 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 AMDHD2Q9Y303 409 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CADP27708 2225 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 IGKV1D-43A0A0B4J1Z2 117 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 A0A1B0GTI1 187 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 MTRF1O75570 445 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 SLC25A4P12235 298 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CD40P25942 277 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 CD34P28906 385 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 RPS27P42677 84 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 LUMP51884 338 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 SRSF4Q08170 494 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 DHRS2Q13268 280 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 TESK1Q15569 626 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 PAN3Q58A45 887 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 FAM74A1Q5RGS3 127 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 MYPOPQ86VE0 399 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ASB17Q8WXJ9 295 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 SEH1LQ96EE3 360 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 TSPAN32Q96QS1 320 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 OR8B4Q96RC9 309 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 TXNIPQ9H3M7 391 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 NGBQ9NPG2 151 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 TNFSF18Q9UNG2 199 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 DHDHQ9UQ10 334 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 NOP16Q9Y3C1 178 aaKnown RBP8.11□□□□□ -1.11
BRCA1-219ENST00000491747 RNF115Q9Y4L5 304 aa8.11□□□□□ -1.11
BRCA1-219ENST00000491747 A0A0A6YYH2 397 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 A6NJ64 397 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 XKRYO14609 159 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 IGHMP01871 453 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 HLA-AP01891 365 aaKnown RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 QDPRP09417 244 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 HTR2CP28335 458 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 MEP1BQ16820 701 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 PABPC1L2AQ5JQF8 200 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 FAM166AQ6J272 317 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 KLHL24Q6TFL4 600 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms