RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 CSTBP04080 98 aaKnown RBP12.02□□□□□ -0.49
VPS26A-205ENST00000489656 GTF2F2P13984 249 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 SERPINA2P20848 420 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 CPT2P23786 658 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 APOBEC3AP31941 199 aaPredicted RBP12.02□□□□□ -0.49
VPS26A-205ENST00000489656 ZNF154Q13106 437 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 MAB21L1Q13394 359 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 C16orf87Q6PH81 154 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 HAGHLQ6PII5 290 aaPredicted RBP12.02□□□□□ -0.49
VPS26A-205ENST00000489656 Q8N402 240 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 SCCPDHQ8NBX0 429 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 OR56B1Q8NGI3 324 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 LILRB1Q8NHL6 650 aaPredicted RBP12.02□□□□□ -0.49
VPS26A-205ENST00000489656 AQP3Q92482 292 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 DIRC2Q96SL1 478 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 BANF2Q9H503 90 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 ELL3Q9HB65 397 aaPredicted RBP12.02□□□□□ -0.49
VPS26A-205ENST00000489656 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 POLDIP2Q9Y2S7 368 aa12.02□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 C19orf84I3L1E1 186 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 SYNGR1O43759 233 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 NOS1APO75052 506 aaPredicted RBP12.01□□□□□ -0.49
VPS26A-205ENST00000489656 PLAUP00749 431 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 SFTPBP07988 381 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 CD55P08174 381 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 CSF3P09919 207 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 SERPINF1P36955 418 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 GATA4P43694 442 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 ZNF81P51508 661 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
VPS26A-205ENST00000489656 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 ZNF672Q499Z4 452 aaPredicted RBP12.01□□□□□ -0.49
VPS26A-205ENST00000489656 DNM1P46Q6ZS02 220 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 C11orf53Q8IXP5 236 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 Q8IYB0 196 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 IZUMO1Q8IYV9 350 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 OSR2Q8N2R0 312 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 DTX3Q8N9I9 347 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 OR2Z1Q8NG97 314 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 OR51T1Q8NGJ9 327 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 OR10K1Q8NGX5 313 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 OR10R2Q8NGX6 335 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 SMIM4Q8WVI0 70 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
VPS26A-205ENST00000489656 PIK3IP1Q96FE7 263 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 ELMOD3Q96FG2 381 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
VPS26A-205ENST00000489656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS26A-205ENST00000489656 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
VPS26A-205ENST00000489656 TRAV18A0A075B6X5 111 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 ISPDA4D126 451 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 B9A039 149 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 GABARAPH6UMI1 98 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 PGA5P0DJD9 388 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 IL7P13232 177 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 BCL3P20749 454 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 NPBWR2P48146 333 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
VPS26A-205ENST00000489656 VEGFCP49767 419 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 RBM11P57052 281 aaKnown RBP12□□□□□ -0.49
VPS26A-205ENST00000489656 FGF12P61328 243 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 ERVK11-1P61568 191 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 IFITM3Q01628 133 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 MADCAM1Q13477 382 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 BAK1Q16611 211 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 MOGAT2Q3SYC2 334 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 HACD4Q5VWC8 232 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 NEUROG1Q92886 237 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 SLAMF9Q96A28 289 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 GAL3ST1Q99999 423 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 NICN1Q9BSH3 213 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 AUNIPQ9H7T9 357 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 CISD1Q9NZ45 108 aaKnown RBP12□□□□□ -0.49
VPS26A-205ENST00000489656 IL19Q9UHD0 177 aa12□□□□□ -0.49
VPS26A-205ENST00000489656 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 M0R233 179 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 SULT1C2O00338 296 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 RHBDL1O75783 438 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 IGHV1-46P01743 117 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 MELTFP08582 738 aa11.99□□□□□ -0.49
VPS26A-205ENST00000489656 GSTP1P09211 210 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms