RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GAFA1Q96PS6 74 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 FKBP14Q9NWM8 211 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 NUP50Q9UKX7 468 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
MDC1-206ENST00000489540 WNK2Q9Y3S1 2297 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 A0A1B0GW55 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 RFPL4AA6NLU0 287 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 RFPL4AL1F8VTS6 287 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 TCF21O43680 179 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 FCN3O75636 299 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 CYB5AP00167 134 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L2P0CJ85 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L3P0CJ86 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L4P0CJ87 422 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L5P0CJ88 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L6P0CJ89 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L7P0CJ90 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4L9Q6RFH8 374 aaPredicted RBP14.37□□□□□ -0.11
MDC1-206ENST00000489540 SLC25A26Q70HW3 274 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 AHSA2Q719I0 299 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 MKXQ8IYA7 352 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
MDC1-206ENST00000489540 UPRTQ96BW1 309 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 SDSLQ96GA7 329 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 CEP19Q96LK0 163 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 CNTD2Q9H8S5 307 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 HES4Q9HCC6 221 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 SCN3BQ9NY72 215 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 DUX4Q9UBX2 424 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 SLC25A10Q9UBX3 287 aaPredicted RBP14.37□□□□□ -0.11
MDC1-206ENST00000489540 RPUSD1Q9UJJ7 312 aaKnown RBP14.37□□□□□ -0.11
MDC1-206ENST00000489540 ZNF222Q9UK12 451 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 ERGIC3Q9Y282 383 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 ARHGAP32A7KAX9 2087 aa14.37□□□□□ -0.11
MDC1-206ENST00000489540 A0A0A6YYJ9 748 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ZNF879B4DU55 563 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ATP6V1G2O95670 118 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 KNG1P01042 644 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 MYF6P23409 242 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 C21orf33P30042 268 aaPredicted RBP14.36□□□□□ -0.11
MDC1-206ENST00000489540 PRDX2P32119 198 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 CAV3P56539 151 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 TAS2R43P59537 309 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 FGF12P61328 243 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 DGUOKQ16854 277 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 XAF1Q6GPH4 301 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 Q8IYB0 196 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ZNF561Q8N587 486 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ZNF485Q8NCK3 441 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 LY6G5BQ8NDX9 201 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 OR13C9Q8NGT0 318 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ZNF418Q8TF45 676 aaPredicted RBP14.36□□□□□ -0.11
MDC1-206ENST00000489540 MYDGFQ969H8 173 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 SMIM19Q96E16 107 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 OPALINQ96PE5 141 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ANKRD60Q9BZ19 345 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 MTCH1Q9NZJ7 389 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
MDC1-206ENST00000489540 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 SULT1B1O43704 296 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 CD2P06729 351 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 KLF17Q5JT82 389 aaPredicted RBP14.35□□□□□ -0.11
MDC1-206ENST00000489540 RNLSQ5VYX0 342 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 DMKNQ6E0U4 476 aaPredicted RBP14.35□□□□□ -0.11
MDC1-206ENST00000489540 IZUMO2Q6UXV1 221 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 USP43Q70EL4 1123 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 TMEM158Q8WZ71 300 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 SLAMF9Q96A28 289 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 DCTN5Q9BTE1 182 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 MAB21L2Q9Y586 359 aa14.35□□□□□ -0.11
MDC1-206ENST00000489540 SIRT4Q9Y6E7 314 aaPredicted RBP14.35□□□□□ -0.11
MDC1-206ENST00000489540 SLC1A7O00341 560 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 MYL12BO14950 172 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 LALBAP00709 142 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 PLATP00750 562 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 CDK1P06493 297 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 SELLP14151 372 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 NDUFB7P17568 137 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 WNT4P56705 351 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 METTL11BQ5VVY1 283 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 FGFRL1Q8N441 504 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 CD177Q8N6Q3 437 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 NANOGP1Q8N7R0 232 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 ZNRF1Q8ND25 227 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 C8orf46Q8TAG6 207 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 GHSRQ92847 366 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 WDFY2Q96P53 400 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 TPRKBQ9Y3C4 175 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
MDC1-206ENST00000489540 MAGEB3O15480 346 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 TOX4O94842 621 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 TFF1P04155 84 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 RAB3AP20336 220 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 SOX2P48431 317 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 POU3F4P49335 361 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 BPIFB3P59826 476 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 ARF6P62330 175 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms