RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 IRF2P14316 349 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 PAX1P15863 534 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 BMXP51813 675 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 ZP1P60852 638 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 PDZK1IP1Q13113 114 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 RAB11BQ15907 218 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 RGS21Q2M5E4 152 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 WDR82Q6UXN9 313 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 C11orf53Q8IXP5 236 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 ZNF525Q8N782 197 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 OR51D1Q8NGF3 324 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 OR11L1Q8NGX0 322 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 SLC25A28Q96A46 364 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 DLL4Q9NR61 685 aa12.02□□□□□ -0.49
CLDN11-209ENST00000489485 MRPS28Q9Y2Q9 187 aaKnown RBP12.02□□□□□ -0.49
CLDN11-209ENST00000489485 RHBDL1O75783 438 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 CYB5R3P00387 301 aaPredicted RBP12.01□□□□□ -0.49
CLDN11-209ENST00000489485 SNRPBP14678 240 aaKnown RBP12.01□□□□□ -0.49
CLDN11-209ENST00000489485 ARSBP15848 533 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 PMELP40967 661 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 GMFBP60983 142 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 RIN1Q13671 783 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 ZNF404Q494X3 552 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 GLIPR1L1Q6UWM5 242 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 BATF2Q8N1L9 274 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 CHPT1Q8WUD6 406 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 AQP3Q92482 292 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 AP3S1Q92572 193 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 FAM3DQ96BQ1 224 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 MBD6Q96DN6 1003 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 S100A13Q99584 98 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
CLDN11-209ENST00000489485 TLNRD1Q9H1K6 362 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 KCNK15Q9H427 330 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 ELL3Q9HB65 397 aaPredicted RBP12.01□□□□□ -0.49
CLDN11-209ENST00000489485 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 DCAF16Q9NXF7 216 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 COMMD3Q9UBI1 195 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 ING4Q9UNL4 249 aa12.01□□□□□ -0.49
CLDN11-209ENST00000489485 CLDN25C9JDP6 229 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 J3QT63 122 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 AKR7A2O43488 359 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 SYNGR1O43759 233 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 CYB5AP00167 134 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 MRPS11P82912 194 aaKnown RBP12□□□□□ -0.49
CLDN11-209ENST00000489485 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 BOLLQ8N9W6 283 aaKnown RBP12□□□□□ -0.49
CLDN11-209ENST00000489485 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 MCFD2Q8NI22 146 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 LRRC29Q8WV35 223 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 HPS1Q92902 700 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 RNF7Q9UBF6 113 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 VPS13CQ709C8 3753 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 IGKV1-12A0A0C4DH73 117 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 IGKV1D-12P01611 117 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 CFPP27918 469 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
CLDN11-209ENST00000489485 SLC22A6Q4U2R8 563 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 OR10K2Q6IF99 312 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 DCDC5Q6ZRR9 648 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 OR5H6Q8NGV6 325 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 OR10K1Q8NGX5 313 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 Q8TCH9 128 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 PKIBQ9C010 78 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 CHODLQ9H9P2 273 aa12□□□□□ -0.49
CLDN11-209ENST00000489485 CTDSP2O14595 271 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 RGS5O15539 181 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 RP2O75695 350 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 ZNF205O95201 554 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 IL24Q13007 206 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 MKXQ8IYA7 352 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 LGALS14Q8TCE9 139 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 FAM46BQ96A09 425 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 SLAMF9Q96A28 289 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
CLDN11-209ENST00000489485 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-209ENST00000489485 ZNF488Q96MN9 340 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 SMURF1Q9HCE7 757 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 MYOZ1Q9NP98 299 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-209ENST00000489485 MTCH1Q9NZJ7 389 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 ABRACLQ9P1F3 81 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 OR5V1Q9UGF6 321 aa11.99□□□□□ -0.49
CLDN11-209ENST00000489485 A0A1W2PP11 408 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 IFNL4K9M1U5 179 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 PPIHO43447 177 aaKnown RBP11.98□□□□□ -0.49
CLDN11-209ENST00000489485 CALCBP10092 127 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 SERPINA2P20848 420 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 MPZP25189 248 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 NPBWR2P48146 333 aa11.98□□□□□ -0.49
CLDN11-209ENST00000489485 RSU1Q15404 277 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms