RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ZNF181Q2M3W8 571 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 PRAMEF6Q5VXH4 476 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 ELP2Q6IA86 826 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 FAM89BQ8N5H3 189 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 OR56B1Q8NGI3 324 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 OR10R2Q8NGX6 335 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 Q96M66 194 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 NUDT16L1Q9BRJ7 211 aaKnown RBP17.72■□□□□ 0.43
SND1-214ENST00000489417 TLNRD1Q9H1K6 362 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 ZDHHC8Q9ULC8 765 aa17.72■□□□□ 0.43
SND1-214ENST00000489417 CDIPTO14735 213 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 RHBDL1O75783 438 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 IGHV1-46P01743 117 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 CSF3P09919 207 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 IFITM3Q01628 133 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 EFNB3Q15768 340 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 FBXL14Q8N1E6 418 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 BATF2Q8N1L9 274 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 MEGF10Q96KG7 1140 aa17.71■□□□□ 0.43
SND1-214ENST00000489417 A6NLC8 198 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 PTBP3O95758 552 aaKnown RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 IL7P13232 177 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 TNFSF4P23510 183 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 SRP9P49458 86 aaKnown RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 MEX3BQ6ZN04 569 aaKnown RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 C11orf53Q8IXP5 236 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 CELF2-AS1Q8N7Q2 184 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 CHST4Q8NCG5 386 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 ZNF488Q96MN9 340 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 OR2V2Q96R30 315 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 DIRC2Q96SL1 478 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 RHOFQ9HBH0 211 aa17.7■□□□□ 0.42
SND1-214ENST00000489417 RBFOX1Q9NWB1 397 aaKnown RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 KLF2Q9Y5W3 355 aaPredicted RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 SMG1Q96Q15 3661 aaKnown RBP17.7■□□□□ 0.42
SND1-214ENST00000489417 B9A039 149 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 F8VVB4 439 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 F8VWA3 439 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 M0R233 179 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 SOCS1O15524 211 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 AKR7A2O43488 359 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 GSTZ1O43708 216 aaPredicted RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 PTHLHP12272 177 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 RBM11P57052 281 aaKnown RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 FGF12P61328 243 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 MRPS10P82664 201 aaKnown RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 TNFAIP6P98066 277 aaPredicted RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 DGCR2P98153 550 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 MPPED2Q15777 294 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 RNASE12Q5GAN4 147 aaKnown RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 ITLN1Q8WWA0 313 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 GCDHQ92947 438 aaPredicted RBP17.69■□□□□ 0.42
SND1-214ENST00000489417 AUNIPQ9H7T9 357 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 UFSP2Q9NUQ7 469 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 ST3GAL6Q9Y274 331 aa17.69■□□□□ 0.42
SND1-214ENST00000489417 ZNF462Q96JM2 2506 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 FOXI3A8MTJ6 420 aaPredicted RBP17.68■□□□□ 0.42
SND1-214ENST00000489417 ADH4P08319 380 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 ACAA1P09110 424 aaPredicted RBP17.68■□□□□ 0.42
SND1-214ENST00000489417 PGA5P0DJD9 388 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 GABRR1P24046 479 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 SRSF1Q07955 248 aaKnown RBP eCLIP17.68■□□□□ 0.42
SND1-214ENST00000489417 DAZAP2Q15038 168 aaPredicted RBP17.68■□□□□ 0.42
SND1-214ENST00000489417 PIGYQ3MUY2 71 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 ZNF260Q3ZCT1 412 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 TRIQKQ629K1 86 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 STEAP3Q658P3 488 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 LYSMD2Q8IV50 215 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 Q8IYB0 196 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 SMIM4Q8WVI0 70 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 RAB3CQ96E17 227 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 POM121Q96HA1 1249 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 NRIP2Q9BQI9 281 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 IL19Q9UHD0 177 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 RELNP78509 3460 aa17.68■□□□□ 0.42
SND1-214ENST00000489417 C17orf100A8MU93 164 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 GABARAPH6UMI1 98 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 BLVRBP30043 206 aaPredicted RBP17.67■□□□□ 0.42
SND1-214ENST00000489417 TMEM50BP56557 158 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 ERVK11-1P61568 191 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 TAF9Q16594 264 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 MST1LQ2TV78 715 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 CDNFQ49AH0 187 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 NHLRC3Q5JS37 347 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 ZNF826PQ6ZT77 177 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 FAM58AQ8N1B3 248 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 POC1AQ8NBT0 407 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 EMG1Q92979 244 aaKnown RBP17.67■□□□□ 0.42
SND1-214ENST00000489417 THAP7Q9BT49 309 aaPredicted RBP17.67■□□□□ 0.42
SND1-214ENST00000489417 DYNLRB1Q9NP97 96 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 C1orf123Q9NWV4 160 aa17.67■□□□□ 0.42
SND1-214ENST00000489417 ANKHD1Q8IWZ3 2542 aaKnown RBP17.67■□□□□ 0.42
SND1-214ENST00000489417 A0A1W2PQ09 198 aa17.66■□□□□ 0.42
SND1-214ENST00000489417 GEMIN2O14893 280 aaKnown RBP17.66■□□□□ 0.42
SND1-214ENST00000489417 NOS1APO75052 506 aaPredicted RBP17.66■□□□□ 0.42
SND1-214ENST00000489417 CD55P08174 381 aa17.66■□□□□ 0.42
SND1-214ENST00000489417 HIST1H1DP16402 221 aaKnown RBP17.66■□□□□ 0.42
SND1-214ENST00000489417 PRKACAP17612 351 aa17.66■□□□□ 0.42
SND1-214ENST00000489417 PRSS3P35030 304 aa17.66■□□□□ 0.42
SND1-214ENST00000489417 GATA4P43694 442 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms