RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SELLP14151 372 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 PRKACBP22694 351 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 PRDX2P32119 198 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 RBP2P50120 134 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 GBX2P52951 348 aaPredicted RBP11.14□□□□□ -0.63
LMO4-203ENST00000489303 ALKBH1Q13686 389 aaKnown RBP11.14□□□□□ -0.63
LMO4-203ENST00000489303 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 FGFRL1Q8N441 504 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 ZNF561Q8N587 486 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 ZNRF1Q8ND25 227 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 LHX4Q969G2 390 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 FGGYQ96C11 551 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 SDSLQ96GA7 329 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 ZNF488Q96MN9 340 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 NRIP2Q9BQI9 281 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 VCXQ9H320 206 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 NOX4Q9NPH5 578 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 MRPS18AQ9NVS2 196 aaKnown RBP11.14□□□□□ -0.63
LMO4-203ENST00000489303 ERVK13-1Q9NX77 482 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 ZNF222Q9UK12 451 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
LMO4-203ENST00000489303 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 TRBV23-1A0A0A0MS06 115 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 TFF1P04155 84 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 EEF1B2P24534 225 aaKnown RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 NANOS3P60323 173 aaKnown RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 GUCA2AQ02747 115 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 MED21Q13503 144 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 ZNF691Q5VV52 312 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 UTS2BQ765I0 119 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 MKXQ8IYA7 352 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 DHRSXQ8N5I4 330 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 DNAAF1Q8NEP3 725 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 OR52I1Q8NGK6 324 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 SPSB1Q96BD6 273 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 CEP19Q96LK0 163 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 ZNF48Q96MX3 618 aaPredicted RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 DUX5Q96PT3 197 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 OR14J1Q9UGF5 321 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 MAB21L2Q9Y586 359 aa11.13□□□□□ -0.63
LMO4-203ENST00000489303 SOX21Q9Y651 276 aaPredicted RBP11.13□□□□□ -0.63
LMO4-203ENST00000489303 TMEM212A6NML5 194 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 OR4C45A6NMZ5 311 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 CLDN34H7C241 214 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 M0R1W7 72 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 KNG1P01042 644 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 ATF1P18846 271 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 MYL12AP19105 171 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 DCKP27707 260 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 PEX2P28328 305 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
LMO4-203ENST00000489303 MTCP1P56278 107 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 IL18R1Q13478 541 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 DEFB112Q30KQ8 113 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 RUSC1-AS1Q66K80 236 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 TMPRSS11AQ6ZMR5 421 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 LHFPL2Q6ZUX7 228 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 SLC25A26Q70HW3 274 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 Q8IYB0 196 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 BATF2Q8N1L9 274 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 OR5AK2Q8NH90 309 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 APH1BQ8WW43 257 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
LMO4-203ENST00000489303 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
LMO4-203ENST00000489303 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
LMO4-203ENST00000489303 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
LMO4-203ENST00000489303 hCG_1809904A0A1W2PP81 198 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 A0A1W2PR64 198 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 A0A1W2PRV1 198 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 H0YAE9 185 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 SPRY1O43609 319 aaPredicted RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 WBP4O75554 376 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 INMTO95050 263 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 CHRM2P08172 466 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 AZGP1P25311 298 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 POU3F4P49335 361 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 ERVK11-1P61568 191 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 RPL31P62899 125 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 SLC9A3R2Q15599 337 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 SMN1Q16637 294 aaKnown RBP11.11□□□□□ -0.63
LMO4-203ENST00000489303 NCR3LG1Q68D85 454 aa11.11□□□□□ -0.63
LMO4-203ENST00000489303 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms