RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC6A1P30531 599 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 PABPC1L2AQ5JQF8 200 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 RREB1Q92766 1687 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 MAP1LC3B2A6NCE7 125 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 PRSS23O95084 383 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 DMKNQ6E0U4 476 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-209ENST00000489180 DUSP18Q8NEJ0 188 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 SCMH1Q96GD3 660 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 MAP1LC3BQ9GZQ8 125 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 SLC35B3Q9H1N7 401 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 SLC25A22Q9H936 323 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 LEUTXA8MZ59 168 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 IGHA1P01876 353 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 CHRNA7P36544 502 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 TSPO2Q5TGU0 170 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 MYPOPQ86VE0 399 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-209ENST00000489180 NTNG2Q96CW9 530 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 FIGNL2A6NMB9 653 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 HEXAP06865 529 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 COL9A1P20849 921 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 HNRNPA3P51991 378 aaKnown RBP15.66■□□□□ 0.1
NPHP4-209ENST00000489180 RNASEKQ6P5S7 137 aaKnown RBP15.66■□□□□ 0.1
NPHP4-209ENST00000489180 PRSS54Q6PEW0 395 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 MBD1Q9UIS9 605 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-209ENST00000489180 ZNF737O75373 536 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 RBP4P02753 201 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 GP1BAP07359 652 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 HIST1H3AP68431 136 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 Q3ZCU0 254 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 TAAR3PQ9P1P4 343 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 ZMIZ1Q9ULJ6 1067 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 FAM109BQ6ICB4 259 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-209ENST00000489180 FAM219AQ8IW50 185 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 ICAM5Q9UMF0 924 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 TRGV8A0A0C4DH27 118 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 CXorf51AA0A1B0GTR3 108 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 CYC1P08574 325 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 MPPED2Q15777 294 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 SLC16A13Q7RTY0 426 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 MOB3AQ96BX8 217 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 FBXO17Q96EF6 278 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 TMEM241Q24JQ0 296 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 C1QL3Q5VWW1 255 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 DHRS7BQ6IAN0 325 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-209ENST00000489180 SPEM1Q8N4L4 309 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 M1APQ8TC57 530 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 PECRQ9BY49 303 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 FAM60AQ9NP50 221 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 FRRS1LQ9P0K9 344 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 CACNA1CQ13936 2221 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 CD160O95971 181 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 NOL4LQ96MY1 436 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-209ENST00000489180 FLRT3Q9NZU0 649 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 NAT8BQ9UHF3 227 aa15.65■□□□□ 0.1
NPHP4-209ENST00000489180 KIAA1324LA8MWY0 1029 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-209ENST00000489180 IGF2P01344 180 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 TMEM33P57088 247 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF141Q15928 474 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OR11H7Q8NGC8 314 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 MISP3Q96FF7 219 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OR2D2Q9H210 308 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 PGA3P0DJD8 388 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 MESTQ5EB52 335 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OR2C3Q8N628 320 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 TRGV5A0A0B4J1U4 118 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 GALNSP34059 522 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 ZIC1Q15915 447 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 KLHDC1Q8N7A1 406 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 CLDN34H7C241 214 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OPN1MWP04001 364 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OPN1MW2P0DN77 364 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OPN1MW3P0DN78 364 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 OR8B12Q8NGG6 310 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF596Q8TC21 504 aa15.64■□□□□ 0.09
NPHP4-209ENST00000489180 CTGFP29279 349 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF83P51522 516 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 LSM11P83369 360 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPHP4-209ENST00000489180 BTNL3Q6UXE8 466 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 LYG1Q8N1E2 194 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 MSL2Q9HCI7 577 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 POMT1Q9Y6A1 747 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 TRAV34A0A0B4J273 112 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 NCBP2LA6PVI3 153 aaKnown RBP15.63■□□□□ 0.09
NPHP4-209ENST00000489180 ZNF205O95201 554 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 ARG1P05089 322 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 OPRK1P41145 380 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 ERVS71-1P61550 626 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 FAM162BQ5T6X4 162 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 PWWP2BQ6NUJ5 590 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 TMEM92Q6UXU6 159 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 OR2T6Q8NHC8 308 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 CHRDL1Q9BU40 450 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 RGS13O14921 159 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 POLR2GP62487 172 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPHP4-209ENST00000489180 HYAL1Q12794 435 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 CD226Q15762 336 aa15.63■□□□□ 0.09
NPHP4-209ENST00000489180 NTMQ9P121 344 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms