RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 AMBNQ9NP70 447 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 C19orf12Q9NSK7 152 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 MYRFQ9Y2G1 1151 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 TRBV23-1A0A0A0MS06 115 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 F8VVB4 439 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 F8VWA3 439 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 J3QLW9 94 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 M0R1W7 72 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 BAG2O95816 211 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 HTR1AP08908 422 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 ZNF19P17023 458 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 FUT6P51993 359 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 TMEM244Q5VVB8 128 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 ZNF561Q8N587 486 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 TMEM86BQ8N661 226 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 OR10AC1Q8NH08 325 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 C10orf35Q96D05 121 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 C4orf36Q96KX1 117 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 MTCH1Q9NZJ7 389 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 OR14J1Q9UGF5 321 aa20.48■□□□□ 0.87
HMGN1-217ENST00000489072 PKD1L1Q8TDX9 2849 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 A0A1W2PRD5 423 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 A0A1W2PRF3 423 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 A0A1W2PRM7 423 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 FAM181BA6NEQ2 426 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 SLC1A7O00341 560 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 MPZL2O60487 215 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 ISG15P05161 165 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 FIP1L1Q6UN15 594 aaKnown RBP20.47■□□□□ 0.87
HMGN1-217ENST00000489072 LHFPL3Q86UP9 236 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 FAM185AQ8N0U4 392 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 PNKDQ8N490 385 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 APH1BQ8WW43 257 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 SSMEM1Q8WWF3 244 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 PP6455Q8WZ26 134 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 ZNF649Q9BS31 505 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 ZNF747Q9BV97 191 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 UNKLQ9H9P5 680 aaKnown RBP20.47■□□□□ 0.87
HMGN1-217ENST00000489072 POMT1Q9Y6A1 747 aa20.47■□□□□ 0.87
HMGN1-217ENST00000489072 DSCAML1Q8TD84 2053 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 MGAM2Q2M2H8 2515 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 IGKV1-9A0A0C4DH69 117 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 OR4C45A6NMZ5 311 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 SERPINA3P01011 423 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 IGHV4-59P01825 116 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 IGHA1P01876 353 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 OMGP23515 440 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 CCR9P51686 369 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 ACTA2P62736 377 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 ACTG2P63267 376 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 GUCA2AQ02747 115 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 GALEQ14376 348 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 LDLRAD3Q86YD5 345 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 OR51A4Q8NGJ6 313 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 SLAMF9Q96A28 289 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 FGGYQ96C11 551 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 BORCS8Q96FH0 119 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 Q96MT0 163 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 ALG8Q9BVK2 526 aa20.46■□□□□ 0.87
HMGN1-217ENST00000489072 METTL8Q9H825 291 aaKnown RBP20.46■□□□□ 0.87
HMGN1-217ENST00000489072 ISG20L2Q9H9L3 353 aaKnown RBP20.46■□□□□ 0.87
HMGN1-217ENST00000489072 NPFFO15130 113 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 INMTO95050 263 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 KNG1P01042 644 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 CNN3Q15417 329 aaKnown RBP20.45■□□□□ 0.86
HMGN1-217ENST00000489072 HCP5Q6MZN7 132 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 SLC25A26Q70HW3 274 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 CEP19Q96LK0 163 aa20.45■□□□□ 0.86
HMGN1-217ENST00000489072 MDKP21741 143 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-217ENST00000489072 IER3P46695 156 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 RPL31P62899 125 aaKnown RBP20.44■□□□□ 0.86
HMGN1-217ENST00000489072 ALKBH1Q13686 389 aaKnown RBP20.44■□□□□ 0.86
HMGN1-217ENST00000489072 ZSCAN26Q16670 478 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 UTS2BQ765I0 119 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 DNAAF1Q8NEP3 725 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 OR4M1Q8NGD0 313 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 ERVK13-1Q9NX77 482 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 SMPD3Q9NY59 655 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-217ENST00000489072 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-217ENST00000489072 FAM96BQ9Y3D0 163 aa20.44■□□□□ 0.86
HMGN1-217ENST00000489072 FADS2O95864 444 aaKnown RBP20.43■□□□□ 0.86
HMGN1-217ENST00000489072 TK1P04183 234 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 ZNF20P17024 532 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 ATF1P18846 271 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 EEF1B2P24534 225 aaKnown RBP20.43■□□□□ 0.86
HMGN1-217ENST00000489072 UBE2E1P51965 193 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 RELBQ01201 579 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 COL10A1Q03692 680 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 RAB40BQ12829 278 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 BLMHQ13867 455 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 NCR3LG1Q68D85 454 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 TMEM200BQ69YZ2 307 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 SYS1Q8N2H4 156 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 OR52I1Q8NGK6 324 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 TBC1D15Q8TC07 691 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 STMN2Q93045 179 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 MRPS18AQ9NVS2 196 aaKnown RBP20.43■□□□□ 0.86
HMGN1-217ENST00000489072 HHLA2Q9UM44 414 aa20.43■□□□□ 0.86
HMGN1-217ENST00000489072 TRRAPQ9Y4A5 3859 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 E9PI62 339 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms