RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ZNF701Q9NV72 531 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC12-221ENST00000489032 TAAR3PQ9P1P4 343 aa6.81□□□□□ -1.32
TRAPPC12-221ENST00000489032 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
TRAPPC12-221ENST00000489032 N6AMT1Q9Y5N5 214 aa6.81□□□□□ -1.32
TRAPPC12-221ENST00000489032 RAI1Q7Z5J4 1906 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM90A7PA6NKC0 464 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM90A22PA8MWA6 464 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM90A12PA8MX19 464 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM90A23PA8MXZ1 464 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 H7C417 338 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OVOL3O00110 214 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 XRCC2O43543 280 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF254O75437 659 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 GABARAPO95166 117 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 NGFP01138 241 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 CD8AP01732 235 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 KRT8P05787 483 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ADRA2AP08913 450 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 PAX1P15863 534 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 MYL12AP19105 171 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 CFL1P23528 166 aaKnown RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 C21orf33P30042 268 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OTX1P32242 354 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OPRL1P41146 370 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 CX3CR1P49238 355 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ERVS71-1P61550 626 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 RBMS2Q15434 407 aaKnown RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 BAK1Q16611 211 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF829Q3KNS6 432 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 KRTAP27-1Q3LI81 207 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 TIMM50Q3ZCQ8 353 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 C11orf71Q6IPW1 123 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF322Q6U7Q0 402 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 LRRN1Q6UXK5 716 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 MRPL21Q7Z2W9 205 aaKnown RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM220AQ7Z4H9 259 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF679Q8IYX0 411 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OR10S1Q8NGN2 331 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 KLF14Q8TD94 323 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 PGAM5Q96HS1 289 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OR8B4Q96RC9 309 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 RHNO1Q9BSD3 238 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 C1QTNF5Q9BXJ0 243 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 OPA3Q9H6K4 179 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ADGRL4Q9HBW9 690 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 DECR2Q9NUI1 292 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 PTTG3PQ9NZH4 202 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF69Q9UC07 566 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 DIMT1Q9UNQ2 313 aaKnown RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 STARD10Q9Y365 291 aa6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 EXOSC1Q9Y3B2 195 aaKnown RBP6.8□□□□□ -1.32
TRAPPC12-221ENST00000489032 IGLV3-9A0A075B6K5 115 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 DAPL1A0PJW8 107 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 GGT3PA6NGU5 568 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ACOD1A6NK06 481 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 J3KRW8 73 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 MYL12BO14950 172 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 IGHV3-13P01766 116 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 TACSTD2P09758 323 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 FAM157CP0CG43 387 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PSKH1P11801 424 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 CD36P16671 472 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 DCTDP32321 178 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ALDH3B1P43353 468 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 SERPINB10P48595 397 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF81P51508 661 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 EFNA4P52798 201 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 HCCSP53701 268 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ZNF121P58317 390 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 SPHARQ15513 63 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PCGF3Q3KNV8 242 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ALKBH6Q3KRA9 238 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ARMCX4Q5H9R4 360 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 COLCA1Q6ZS62 124 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PGAP1Q75T13 922 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 LRP11Q86VZ4 500 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 ACBD7Q8N6N7 88 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 SPRYD4Q8WW59 207 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 IGFBPL1Q8WX77 278 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 CMBLQ96DG6 245 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 AMELYQ99218 206 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 TBX5Q99593 518 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 RGCCQ9H4X1 137 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 FGF20Q9NP95 211 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 YAE1D1Q9NRH1 226 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PPP1R14DQ9NXH3 145 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 PURGQ9UJV8 347 aaKnown RBP6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 KLHDC2Q9Y2U9 406 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 LRP12Q9Y561 859 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 MEGF8Q7Z7M0 2845 aa6.79□□□□□ -1.32
TRAPPC12-221ENST00000489032 TMEM269A0A1B0GVZ9 245 aa6.78□□□□□ -1.32
TRAPPC12-221ENST00000489032 TMEM129A0AVI4 362 aa6.78□□□□□ -1.32
TRAPPC12-221ENST00000489032 GAGE10A6NGK3 116 aa6.78□□□□□ -1.32
TRAPPC12-221ENST00000489032 METTL15A6NJ78 407 aa6.78□□□□□ -1.32
TRAPPC12-221ENST00000489032 C17orf100A8MU93 164 aa6.78□□□□□ -1.32
TRAPPC12-221ENST00000489032 CCRL2O00421 344 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms