RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CALHM1Q8IU99 346 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 OR10K1Q8NGX5 313 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 GCDHQ92947 438 aaPredicted RBP9.34□□□□□ -0.91
COL21A1-211ENST00000488912 DACT3Q96B18 629 aaPredicted RBP9.34□□□□□ -0.91
COL21A1-211ENST00000488912 RADILQ96JH8 1075 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 TUBG2Q9NRH3 451 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 FBLN5Q9UBX5 448 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 PURGQ9UJV8 347 aaKnown RBP9.34□□□□□ -0.91
COL21A1-211ENST00000488912 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 MPC1Q9Y5U8 109 aa9.34□□□□□ -0.91
COL21A1-211ENST00000488912 ANKHD1Q8IWZ3 2542 aaKnown RBP9.34□□□□□ -0.91
COL21A1-211ENST00000488912 DPRXA6NFQ7 191 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 CDC14BO60729 498 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 UBBP0CG47 229 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 TMEM225BP0DP42 221 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 SELEP16581 610 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 TAS2R20P59543 309 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 BSPH1Q075Z2 132 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF718Q3SXZ3 478 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 BAIAP2L2Q6UXY1 529 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 SSX8Q7RTT4 187 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 OR2W3Q7Z3T1 314 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 CDH24Q86UP0 819 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 C1orf174Q8IYL3 243 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-211ENST00000488912 BANF2Q9H503 90 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ELL3Q9HB65 397 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ING4Q9UNL4 249 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ROS1P08922 2347 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ABCD4O14678 606 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 XRCC3O43542 346 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 CRTAPO75718 401 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-211ENST00000488912 MPIG6BO95866 241 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 PTHLHP12272 177 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 SERPINA2P20848 420 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 KITLGP21583 273 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 PTAFRP25105 342 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 GCH1P30793 250 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 SNRPD2P62316 118 aaKnown RBP9.33□□□□□ -0.92
COL21A1-211ENST00000488912 MOGAT2Q3SYC2 334 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 RNASE12Q5GAN4 147 aaKnown RBP9.33□□□□□ -0.92
COL21A1-211ENST00000488912 VHLLQ6RSH7 139 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 ACBD4Q8NC06 268 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 OR5A2Q8NGI9 324 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 KCNG3Q8TAE7 436 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 FBXW5Q969U6 566 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 S100A13Q99584 98 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 KCNJ16Q9NPI9 418 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
COL21A1-211ENST00000488912 IGKV1-12A0A0C4DH73 117 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TIMM8AO60220 97 aaPredicted RBP9.32□□□□□ -0.92
COL21A1-211ENST00000488912 IGKV1D-12P01611 117 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 GLRXP35754 106 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 HAAOP46952 286 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 DGCR2P98153 550 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 PITPNAQ00169 270 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 PDZK1IP1Q13113 114 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 IGSF11Q5DX21 431 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 MTFR2Q6P444 385 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 LRP11Q86VZ4 500 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 C9orf62Q8N4C0 152 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF611Q8N823 705 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 OR8G5Q8NG78 346 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TMEM171Q8WVE6 324 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 PHF21AQ96BD5 680 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 HYLS1Q96M11 299 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 HIST1H2AAQ96QV6 131 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ADAT1Q9BUB4 502 aaKnown RBP9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TMEM59Q9BXS4 323 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 CST11Q9H112 138 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 AUNIPQ9H7T9 357 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TRAV18A0A075B6X5 111 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 LANCL1O43813 399 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ZG16O60844 167 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 MGMTP16455 207 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 MNDAP41218 407 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TFF3Q07654 80 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ZNF273Q14593 569 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 CLLU1Q5K131 121 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 SLC25A26Q70HW3 274 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 OR10AD1Q8NGE0 317 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 OR8H1Q8NGG4 311 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 OR8S1Q8NH09 359 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 LINC01560Q8TB33 94 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 LPAR5Q9H1C0 372 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 IFT46Q9NQC8 304 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 U3KQ87 197 aa9.32□□□□□ -0.92
COL21A1-211ENST00000488912 CHD3Q12873 2000 aaKnown RBP9.31□□□□□ -0.92
COL21A1-211ENST00000488912 A0A0A6YYD4 124 aa9.31□□□□□ -0.92
COL21A1-211ENST00000488912 RPS10-NUDT3A0A1W2PQS6 291 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms