RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DSCAMO60469 2012 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 C5orf63A6NC05 138 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SSNA1O43805 119 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 AKAIN1P0CW23 69 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SLC2A1P11166 492 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SLC6A9P48067 706 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 CX3CR1P49238 355 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 RBMS2Q15434 407 aaKnown RBP16.56■□□□□ 0.24
CCM2-216ENST00000488727 ADIPOQQ15848 244 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SPATA46Q5T0L3 261 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 DRAM2Q6UX65 266 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SLC7A5P1Q8MH63 180 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ZNF283Q8N7M2 679 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ZNF611Q8N823 705 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ADAT3Q96EY9 351 aaPredicted RBP16.56■□□□□ 0.24
CCM2-216ENST00000488727 METTL17Q9H7H0 456 aaPredicted RBP16.56■□□□□ 0.24
CCM2-216ENST00000488727 STARD10Q9Y365 291 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ITPR2Q14571 2701 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 SPG11Q96JI7 2443 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 SNRPGP15A8MWD9 76 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 ZNF780AO75290 641 aaPredicted RBP16.55■□□□□ 0.24
CCM2-216ENST00000488727 LPLP06858 475 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 DANCRP0C864 163 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 PPP1CBP62140 327 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 GUCA2AQ02747 115 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 BEST4Q8NFU0 473 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 OR4D6Q8NGJ1 314 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 APOBEC3DQ96AK3 386 aaPredicted RBP16.55■□□□□ 0.24
CCM2-216ENST00000488727 DACT3Q96B18 629 aaPredicted RBP16.55■□□□□ 0.24
CCM2-216ENST00000488727 FBLN5Q9UBX5 448 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 FZR1Q9UM11 496 aa16.55■□□□□ 0.24
CCM2-216ENST00000488727 BPNT1O95861 308 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 LCATP04180 440 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 ERCC1P07992 297 aaPredicted RBP16.54■□□□□ 0.24
CCM2-216ENST00000488727 OR4A8P0C604 315 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 APOBEC3AP31941 199 aaPredicted RBP16.54■□□□□ 0.24
CCM2-216ENST00000488727 FABP6P51161 128 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 ZP1P60852 638 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 SNAI3Q3KNW1 292 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 RAB12Q6IQ22 244 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 FAAP20Q6NZ36 180 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 CDH26Q8IXH8 852 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 SPICQ8N5J4 248 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 TMEM229BQ8NBD8 167 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 OR8B12Q8NGG6 310 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 OR5D14Q8NGL3 314 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 SLC25A40Q8TBP6 338 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 MARS2Q96GW9 593 aaKnown RBP16.54■□□□□ 0.24
CCM2-216ENST00000488727 OR2J1Q9GZK6 312 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 GPN1Q9HCN4 374 aaPredicted RBP16.54■□□□□ 0.24
CCM2-216ENST00000488727 SCP2D1Q9UJQ7 156 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 RAB22AQ9UL26 194 aa16.54■□□□□ 0.24
CCM2-216ENST00000488727 SOD3P08294 240 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 RAB3AP20336 220 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF121P58317 390 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 RPS23P62266 143 aaKnown RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF626Q68DY1 528 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 RGS7BPQ6MZT1 257 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF782Q6ZMW2 699 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 SEH1LQ96EE3 360 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 NKX3-1Q99801 234 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 NUDT16L1Q9BRJ7 211 aaKnown RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF436Q9C0F3 470 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 CNTD2Q9H8S5 307 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 BEX1Q9HBH7 125 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 DLL4Q9NR61 685 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 POLQO75417 2590 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 J3QW42 95 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 SCGNO76038 276 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 MELTFP08582 738 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 GTF2F2P13984 249 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF20P17024 532 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 GNALP38405 381 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 MPV17P39210 176 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 TAS2R19P59542 299 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 UNQ6126/PRO20091Q6UXV3 157 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 Q6ZTK2 550 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 LRP11Q86VZ4 500 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 MUC15Q8N387 334 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 OR52N4Q8NGI2 321 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 OR51E1Q8TCB6 317 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF431Q8TF32 576 aaPredicted RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 MRPL24Q96A35 216 aaKnown RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 MRPL37Q9BZE1 423 aaKnown RBP16.53■□□□□ 0.24
CCM2-216ENST00000488727 ZNF319Q9P2F9 582 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 HSPB11Q9Y547 144 aa16.53■□□□□ 0.24
CCM2-216ENST00000488727 METTL21EPA6NDL7 271 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 CD8AP01732 235 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 ZNF250P15622 560 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 SERPINF1P36955 418 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 QRFPP83859 136 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 MST1LQ2TV78 715 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 FAM57BQ71RH2 274 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 PGAP1Q75T13 922 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 DOK3Q7L591 496 aa16.52■□□□□ 0.24
CCM2-216ENST00000488727 KLF14Q8TD94 323 aaPredicted RBP16.52■□□□□ 0.24
CCM2-216ENST00000488727 MYEF2Q9P2K5 600 aaKnown RBP16.52■□□□□ 0.24
CCM2-216ENST00000488727 ARFGEF3Q5TH69 2177 aa16.52■□□□□ 0.23
CCM2-216ENST00000488727 CREBL2O60519 120 aaPredicted RBP16.51■□□□□ 0.23
CCM2-216ENST00000488727 IGLV3-1P01715 115 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms