RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ADAM20O43506 726 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 CD5LO43866 347 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SC5DO75845 299 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 NXPH2O95156 264 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 HEXAP06865 529 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SELLP14151 372 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 BCL3P20749 454 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 MAPK3P27361 379 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 BDKRB2P30411 391 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 OR3A4PP47883 348 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 GZMKP49863 264 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 GP2P55259 537 aaKnown RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 ZP1P60852 638 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 LCN2P80188 198 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 FABP5Q01469 135 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 IL24Q13007 206 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 GPR50Q13585 617 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 KISS1Q15726 138 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 MICBQ29980 383 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SMIM21Q3B7S5 101 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 STUMQ69YW2 141 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM91Q6ZNR0 172 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 CEACAM19Q7Z692 300 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SATL1Q86VE3 508 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 FGFRL1Q8N441 504 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 TSPAN14Q8NG11 270 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF671Q8TAW3 534 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 TMIGD2Q96BF3 282 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 CEP19Q96LK0 163 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 GPER1Q99527 375 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 FAM192AQ9GZU8 254 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 PPIL3Q9H2H8 161 aaKnown RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SMURF1Q9HCE7 757 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 RBFOX1Q9NWB1 397 aaKnown RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 MTCH1Q9NZJ7 389 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 NLKQ9UBE8 527 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 IL36RNQ9UBH0 155 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SF3B6Q9Y3B4 125 aaKnown RBP9.22□□□□□ -0.93
UBE4B-210ENST00000488228 SETD2Q9BYW2 2564 aaPredicted RBP9.21□□□□□ -0.93
UBE4B-210ENST00000488228 IGKV1D-17A0A075B6S4 117 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 NKX6-3A6NJ46 265 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 KIAA1324LA8MWY0 1029 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 TMPRSS2O15393 492 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 FCN3O75636 299 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 ALX3O95076 343 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 FSTL3O95633 263 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 MAS1P04201 325 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 SMIM18P0DKX4 95 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 CALCBP10092 127 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 MUC1P15941 1255 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 AMY2BP19961 511 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 GABRA5P31644 462 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 TGFBR2P37173 567 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 NPBWR2P48146 333 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 PITPNBP48739 271 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 SNU13P55769 128 aaKnown RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 ERVK11-1P61568 191 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 PDZK1IP1Q13113 114 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 HSD17B12Q53GQ0 312 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 CYB5R2Q6BCY4 276 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 ACP7Q6ZNF0 438 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 NLRC3Q7RTR2 1065 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 OR8B3Q8NGG8 313 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 OR51F2Q8NH61 342 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 TNFAIP8L1Q8WVP5 186 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 THRSPQ92748 146 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 EMG1Q92979 244 aaKnown RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 MUL1Q969V5 352 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 NEIL1Q96FI4 390 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-210ENST00000488228 C1orf159Q96HA4 380 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 GAFA1Q96PS6 74 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 OR8B2Q96RD0 313 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 CCL13Q99616 98 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 HES4Q9HCC6 221 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 TMEM138Q9NPI0 162 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF222Q9UK12 451 aa9.21□□□□□ -0.94
UBE4B-210ENST00000488228 A0A087WXM4 84 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 OR2AT4A6NND4 320 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 B4DSR2 109 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 CCRL2O00421 344 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 MAGEB3O15480 346 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 NOS1APO75052 506 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-210ENST00000488228 CYB5AP00167 134 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 TGFAP01135 160 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 SFTPBP07988 381 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 MSMBP08118 114 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 WNT2P09544 360 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 UCHL1P09936 223 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 TMEM225BP0DP42 221 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 PSG2P11465 335 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 ADRA2CP18825 462 aa9.2□□□□□ -0.94
UBE4B-210ENST00000488228 PSMA1P25786 263 aaKnown RBP9.2□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF93P35789 620 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-210ENST00000488228 IKZF1Q13422 519 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms