RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DDI2Q5TDH0 399 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 FIP1L1Q6UN15 594 aaKnown RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 UNQ9370/PRO34162Q6UXP9 181 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 Q8IYB0 196 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 OR51A2Q8NGJ7 313 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 OR5D18Q8NGL1 313 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 NEIL1Q96FI4 390 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ZNF488Q96MN9 340 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ZNF696Q9H7X3 374 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-219ENST00000488186 NLKQ9UBE8 527 aa13.17□□□□□ -0.3
C9orf3-219ENST00000488186 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
C9orf3-219ENST00000488186 MEGF11A6BM72 1044 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 NKX6-3A6NJ46 265 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 NOS1APO75052 506 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-219ENST00000488186 GPX5O75715 221 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 ARL6IP5O75915 188 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 ACAA1P09110 424 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-219ENST00000488186 FSTP19883 344 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 INSL4Q14641 139 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 ZNF529Q6P280 563 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 SLC36A1Q7Z2H8 476 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 JAGN1Q8N5M9 183 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 TNFAIP8L1Q8WVP5 186 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 PHYHIPQ92561 330 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 SEH1LQ96EE3 360 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 SMR3AQ99954 134 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 LPAR2Q9HBW0 351 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 SMURF1Q9HCE7 757 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
C9orf3-219ENST00000488186 TRAV8-7A0A075B6U6 113 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 OR2AT4A6NND4 320 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 ANGPTL7O43827 346 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 FOXH1O75593 365 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 LY6G6DO95868 133 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 WNT2P09544 360 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-219ENST00000488186 SRMP19623 302 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 PITPNBP48739 271 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 GNB2P62879 340 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 FAM166AQ6J272 317 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 LYPD2Q6UXB3 125 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 EMG1Q92979 244 aaKnown RBP13.15□□□□□ -0.3
C9orf3-219ENST00000488186 MSI2Q96DH6 328 aaKnown RBP13.15□□□□□ -0.3
C9orf3-219ENST00000488186 MED30Q96HR3 178 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 CCL13Q99616 98 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 YAE1D1Q9NRH1 226 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 CLN8Q9UBY8 286 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 GLS2Q9UI32 602 aa13.15□□□□□ -0.3
C9orf3-219ENST00000488186 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 FAM157AC9JC47 383 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 GABRPO00591 440 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 PIN1P1O15428 100 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 CD5LO43866 347 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 MSMBP08118 114 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 BCL3P20749 454 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 NPY4RP50391 375 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 LCN2P80188 198 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 FABP5Q01469 135 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 RSU1Q15404 277 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 SSX1Q16384 188 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 FAM27D1Q5T7N8 215 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 GLCCI1Q86VQ1 547 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 SAXO1Q8IYX7 474 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 FAM58AQ8N1B3 248 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 NKAIN3Q8N8D7 197 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-219ENST00000488186 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-219ENST00000488186 GSX1Q9H4S2 264 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-219ENST00000488186 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
C9orf3-219ENST00000488186 PCDHB16Q9NRJ7 776 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 KCNS2Q9ULS6 477 aa13.14□□□□□ -0.31
C9orf3-219ENST00000488186 SF3B6Q9Y3B4 125 aaKnown RBP13.14□□□□□ -0.31
C9orf3-219ENST00000488186 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 RFPL4AA6NLU0 287 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 RFPL4AL1F8VTS6 287 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-219ENST00000488186 NDUFB3O43676 98 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 UCHL1P09936 223 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 PSG2P11465 335 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 ZNF16P17020 682 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-219ENST00000488186 PRKACAP17612 351 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
C9orf3-219ENST00000488186 PRDX2P32119 198 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 PTGFRP43088 359 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms