RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 M0R1B8 84 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 CYB5AP00167 134 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NAT1P18440 290 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NPBWR2P48146 333 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 RAG2P55895 527 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 GNG2P59768 71 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NKX6-1P78426 367 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 LY6DQ14210 128 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 CARTPTQ16568 116 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 PIGYQ3MUY2 71 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NHLRC3Q5JS37 347 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 SFRP4Q6FHJ7 346 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 STEAP1BQ6NZ63 245 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF554Q86TJ5 538 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF573Q86YE8 665 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 FBXL14Q8N1E6 418 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 OR8G5Q8NG78 346 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 RTL8AQ9BWD3 113 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 PKIBQ9C010 78 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 OR51I2Q9H344 312 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 PCDHB16Q9NRJ7 776 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 MTCH1Q9NZJ7 389 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF581Q9P0T4 197 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 COL6A6A6NMZ7 2263 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 GEMIN2O14893 280 aaKnown RBP8.05□□□□□ -1.12
SF3B1-211ENST00000487698 BCL3P20749 454 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 GABRR1P24046 479 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 CHATP28329 748 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 CASP6P55212 293 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 IL24Q13007 206 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 TAF9Q16594 264 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF718Q3SXZ3 478 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 MKXQ8IYA7 352 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 GVQW1Q8N7I0 195 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 SLAMF9Q96A28 289 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ADAT1Q9BUB4 502 aaKnown RBP8.05□□□□□ -1.12
SF3B1-211ENST00000487698 C20orf85Q9H1P6 137 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 MCUBQ9NWR8 336 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ST3GAL6Q9Y274 331 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 TRAV6A0A075B6T7 132 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 C7orf66A4D0T2 115 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 LRP5LA4QPB2 252 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A10PA6NDY2 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A18PA6NE21 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A16PA6NEW6 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A20PA6NIJ5 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A8PA6NJQ4 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A7PA6NKC0 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A22PA8MWA6 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A12PA8MX19 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A5PA8MXJ8 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A23PA8MXZ1 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF736B4DX44 427 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-211ENST00000487698 F8VVB4 439 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 F8VWA3 439 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 J3QT63 122 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 MLNRO43193 412 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 SYNGR1O43759 233 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 NDUFB6O95139 128 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 CRYAAP02489 173 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FCER2P06734 321 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A15PP0C7V4 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A13PP0C7W8 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A14PP0C7W9 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FAM90A24PP0C7X0 464 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF735P0CB33 412 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 TRAPPC2P0DI81 140 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 TRAPPC2BP0DI82 140 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 HLA-DMAP28067 261 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FGF12P61328 243 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 CD300CQ08708 224 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 HAGHLQ6PII5 290 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-211ENST00000487698 SSX8Q7RTT4 187 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 C6orf201Q7Z4U5 140 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 OR4S1Q8NGB4 309 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 OR10AD1Q8NGE0 317 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 OR8S1Q8NH09 359 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 OR56B4Q8NH76 319 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 SNAPC3Q92966 411 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 FBXW5Q969U6 566 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 MICU1Q9BPX6 476 aa8.05□□□□□ -1.12
SF3B1-211ENST00000487698 CHD3Q12873 2000 aaKnown RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 RAB3DO95716 219 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 THBDP07204 575 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF250P15622 560 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 TBPP20226 339 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 GCH1P30793 250 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 GLRXP35754 106 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 CBX5P45973 191 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 RAB25P57735 213 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 IGFBP7Q16270 282 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 OR52W1Q6IF63 320 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms