RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ASCL1P50553 236 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 OR1C1Q15619 314 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 POMT1Q9Y6A1 747 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 PLA2G10O15496 165 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 COL9A1P20849 921 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 PSG6Q00889 435 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 SLC38A11Q08AI6 406 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 FZD5Q13467 585 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 C1QTNF12Q5T7M4 302 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 PRR27Q6MZM9 219 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 SLC24A4Q8NFF2 622 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
EPHB4-206ENST00000487222 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 MMP24Q9Y5R2 645 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 ERVFC1-1P60608 527 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 ZNF66Q6ZN08 573 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 ATG4DQ86TL0 474 aaPredicted RBP13.07□□□□□ -0.32
EPHB4-206ENST00000487222 GVQW1Q8N7I0 195 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 UBAC2Q8NBM4 344 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 VSTM2LQ96N03 204 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 HSBP1O75506 76 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 MPZL1O95297 269 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 GABRA1P14867 456 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 GZMMP51124 257 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 IGFBP7Q16270 282 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 B3GNTL1Q67FW5 361 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-206ENST00000487222 OR6X1Q8NH79 312 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 FAM96BQ9Y3D0 163 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 FAM24AA6NFZ4 105 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 CEACAM6P40199 344 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 M1APQ8TC57 530 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 TMPRSS13Q9BYE2 586 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 P4HTMQ9NXG6 502 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 FRRS1LQ9P0K9 344 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 MAP1LC3B2A6NCE7 125 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-206ENST00000487222 OR5AC1P0C628 307 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 F2RP25116 425 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
EPHB4-206ENST00000487222 MAP1LC3BQ9GZQ8 125 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 SERTM2A0A1B0GWG4 89 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 A0A1W2PQD3 144 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-206ENST00000487222 CXCL3P19876 107 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 INPP5JQ15735 1006 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-206ENST00000487222 TMEM241Q24JQ0 296 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 MESTQ5EB52 335 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 GUSBP11Q6P575 273 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 C9orf62Q8N4C0 152 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 C17orf78Q8N4C9 275 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
EPHB4-206ENST00000487222 B3GALNT1O75752 331 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 KRTDAPP60985 99 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ZFP64Q9NPA5 681 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ZNF107Q9UII5 783 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 LPAR6P43657 344 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 SNRPEP62304 92 aaKnown RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 BARX1Q9HBU1 254 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 UBR3Q6ZT12 1888 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 OR5H15A6NDH6 313 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 OR4C45A6NMZ5 311 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 HRASP01112 189 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 TMEM33P57088 247 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 CD226Q15762 336 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 FAM24BQ8N5W8 94 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 OR10V1Q8NGI7 309 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 NUBPLQ8TB37 319 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 LSM2Q9Y333 95 aaKnown RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 YTHDF2Q9Y5A9 579 aaKnown RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 TRAPPC1Q9Y5R8 145 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ADAP1O75689 374 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 TNFRSF1AP19438 455 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ETFDHQ16134 617 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 FAM109BQ6ICB4 259 aaPredicted RBP13.05□□□□□ -0.32
EPHB4-206ENST00000487222 UBALD1Q8TB05 177 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ZNRF4Q8WWF5 429 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 ASB10Q8WXI3 467 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 SCMH1Q96GD3 660 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 HES4Q9HCC6 221 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 OPN4Q9UHM6 478 aa13.05□□□□□ -0.32
EPHB4-206ENST00000487222 SLC31A2O15432 143 aa13.04□□□□□ -0.32
EPHB4-206ENST00000487222 CRHP06850 196 aa13.04□□□□□ -0.32
EPHB4-206ENST00000487222 FABP4P15090 132 aa13.04□□□□□ -0.32
EPHB4-206ENST00000487222 SRD5A2P31213 254 aa13.04□□□□□ -0.32
EPHB4-206ENST00000487222 PPP1CAP62136 330 aa13.04□□□□□ -0.32
EPHB4-206ENST00000487222 DEFB109BQ30KR1 87 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms