RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RGS7BPQ6MZT1 257 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 STEAP1BQ6NZ63 245 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 VHLLQ6RSH7 139 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF782Q6ZMW2 699 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 SLC25A26Q70HW3 274 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 BTN2A1Q7KYR7 527 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 TRAPPC6BQ86SZ2 158 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF554Q86TJ5 538 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 FJX1Q86VR8 437 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM200AQ86VY9 491 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 CADM3Q8N126 398 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 SPERTQ8NA61 448 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 OR8G5Q8NG78 346 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 KLF14Q8TD94 323 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 HPSE2Q8WWQ2 592 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 OR5P3Q8WZ94 311 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 LRRC46Q96FV0 321 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MARS2Q96GW9 593 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 Q96M66 194 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 DMRTA2Q96SC8 542 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 NICN1Q9BSH3 213 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ADAT1Q9BUB4 502 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PECRQ9BY49 303 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PKIBQ9C010 78 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PLK3Q9H4B4 646 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ZMAT3Q9HA38 289 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 RHOFQ9HBH0 211 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM100Q9NV29 134 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MCUBQ9NWR8 336 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 NPAP1Q9NZP6 1156 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 JKAMPQ9P055 326 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PURGQ9UJV8 347 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PLEKHA6Q9Y2H5 1048 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MEMO1Q9Y316 297 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 CEP295Q9C0D2 2601 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MED19A0JLT2 244 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 LRP5LA4QPB2 252 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A10PA6NDY2 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A18PA6NE21 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A16PA6NEW6 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A20PA6NIJ5 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A8PA6NJQ4 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A7PA6NKC0 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM210A6NLX4 147 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A22PA8MWA6 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A12PA8MX19 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A5PA8MXJ8 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A23PA8MXZ1 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF736B4DX44 427 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 DISC1C4P0D8 188 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 J3QT63 122 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 MFNGO00587 321 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 TIMM8AO60220 97 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 PRAF2O60831 178 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 RAB3DO95716 219 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A15PP0C7V4 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A13PP0C7W8 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A14PP0C7W9 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM90A24PP0C7X0 464 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 TBPP20226 339 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 KITLGP21583 273 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 BTCP35070 178 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ASCL1P50553 236 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 CCR6P51684 374 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM50BP56557 158 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 SELENOVP59797 346 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ERVS71-1P61550 626 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 FAM27E3Q08E93 113 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 PSG7Q13046 419 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ESPL1Q14674 2120 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 MEF2DQ14814 521 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ZMYND11Q15326 602 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ACTBL2Q562R1 376 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 RNASE10Q5GAN6 216 aaKnown RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 MBNL2Q5VZF2 373 aaKnown RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 SFRP4Q6FHJ7 346 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ELP2Q6IA86 826 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 LINC00596Q86U02 117 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 CALHM1Q8IU99 346 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 Q8IYB0 196 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 RELL2Q8NC24 303 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 Q8NFD4 153 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 OR4C16Q8NGL9 310 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 OR56B4Q8NH76 319 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 NUDCD2Q8WVJ2 157 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ARHGAP5-AS1Q96IT6 56 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 NGBQ9NPG2 151 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 NUDT15Q9NV35 164 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 PLEKHJ1Q9NW61 149 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 COQ3Q9NZJ6 369 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 CRIM1Q9NZV1 1036 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 HSF4Q9ULV5 492 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 ST3GAL6Q9Y274 331 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 POLDIP2Q9Y2S7 368 aa6.03□□□□□ -1.44
SF3A3-206ENST00000487062 PRRC2CQ9Y520 2896 aaKnown RBP6.03□□□□□ -1.44
SF3A3-206ENST00000487062 MGAQ8IWI9 3026 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 IGKV1-12A0A0C4DH73 117 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 WIPF3A6NGB9 483 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms