RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 IGHV1-8P0DP01 117 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 AZGP1P25311 298 aaKnown RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 GINS1Q14691 196 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 ZNF829Q3KNS6 432 aaPredicted RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 FAM98BQ52LJ0 330 aaKnown RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 CLVS2Q5SYC1 327 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 MINOS1Q5TGZ0 78 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 C11orf87Q6NUJ2 197 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 CPOQ8IVL8 374 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 ASCC1Q8N9N2 400 aaKnown RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 GIPC3Q8TF64 312 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 RCC1LQ96I51 464 aaKnown RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 TEAD3Q99594 435 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 OCSTAMPQ9BR26 566 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 FAM107BQ9H098 131 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 HES4Q9HCC6 221 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 NUFIP1Q9UHK0 495 aaKnown RBP16.1■□□□□ 0.17
PHF1-208ENST00000486845 MINOS1-NBL1R4GNA1 71 aa16.1■□□□□ 0.17
PHF1-208ENST00000486845 PQLC2LA1A4F0 135 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 ARRDC5A6NEK1 342 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 SNX3O60493 162 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 DUS4LO95620 317 aaKnown RBP16.09■□□□□ 0.17
PHF1-208ENST00000486845 SLC34A1Q06495 639 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 ZNF446Q9NWS9 450 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.09■□□□□ 0.17
PHF1-208ENST00000486845 HILPDAQ9Y5L2 63 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 RYR3Q15413 4870 aa16.09■□□□□ 0.17
PHF1-208ENST00000486845 PSMD9O00233 223 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 ZNF254O75437 659 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 MPZP25189 248 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 HCCSP53701 268 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 EDDM3BP56851 147 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 COL10A1Q03692 680 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 DEFB121Q5J5C9 76 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 ASRGL1Q7L266 308 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 GDPD3Q7L5L3 318 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 BATF2Q8N1L9 274 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 BBS1Q8NFJ9 593 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 ZNF714Q96N38 554 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 GPR173Q9NS66 373 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.16
PHF1-208ENST00000486845 SLC22A13Q9Y226 551 aa16.08■□□□□ 0.16
PHF1-208ENST00000486845 TSSC4Q9Y5U2 329 aaPredicted RBP16.08■□□□□ 0.16
PHF1-208ENST00000486845 DSCAML1Q8TD84 2053 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 TCRBV4S1A1TA0A5B7 111 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 DLGAP1O14490 977 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 SLC2A5P22732 501 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 RIDAP52758 137 aaKnown RBP16.07■□□□□ 0.16
PHF1-208ENST00000486845 ERVK11-1P61568 191 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ACTA2P62736 377 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ACTG2P63267 376 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ACTC1P68032 377 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ACTA1P68133 377 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ROM1Q03395 351 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 TMEM42Q69YG0 159 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 C16orf82Q7Z2V1 217 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 CENPVQ7Z7K6 275 aaPredicted RBP16.07■□□□□ 0.16
PHF1-208ENST00000486845 DHFR2Q86XF0 187 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ZNF679Q8IYX0 411 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 NDNFQ8TB73 568 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 ASB17Q8WXJ9 295 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 MED4Q9NPJ6 270 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 DNAH9Q9NYC9 4486 aa16.07■□□□□ 0.16
PHF1-208ENST00000486845 WI2-2373I1.2A0A1W2PRP0 233 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 MEX3AA1L020 520 aaKnown RBP16.06■□□□□ 0.16
PHF1-208ENST00000486845 FAM90A22PA8MWA6 464 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 ZNF737O75373 536 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
PHF1-208ENST00000486845 CLIC3O95833 236 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 TTRP02766 147 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 CHRM2P08172 466 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 JUNBP17275 347 aaPredicted RBP16.06■□□□□ 0.16
PHF1-208ENST00000486845 ESRRGP62508 458 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 MEF2CQ06413 473 aaPredicted RBP16.06■□□□□ 0.16
PHF1-208ENST00000486845 APOFQ13790 326 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 CCDC121Q6ZUS5 278 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 AKR1E2Q96JD6 320 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 TEX12Q9BXU0 123 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 PKIBQ9C010 78 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 MOB1AQ9H8S9 216 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 IKZF2Q9UKS7 526 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 TMEM14AQ9Y6G1 99 aa16.06■□□□□ 0.16
PHF1-208ENST00000486845 VSIG8P0DPA2 414 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 KRTAP10-11P60412 298 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 CDK5Q00535 292 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 MFGE8Q08431 387 aaPredicted RBP16.05■□□□□ 0.16
PHF1-208ENST00000486845 IL24Q13007 206 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 IL18R1Q13478 541 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 TCTEX1D4Q5JR98 221 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 OR8H2Q8N162 312 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 CAPSLQ8WWF8 208 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 MYDGFQ969H8 173 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 DNAJB9Q9UBS3 223 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 GTF2A1LQ9UNN4 478 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 SESN1Q9Y6P5 492 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 V9GYS6 101 aa16.05■□□□□ 0.16
PHF1-208ENST00000486845 IGHV2-26A0A0B4J1V2 119 aa16.04■□□□□ 0.16
PHF1-208ENST00000486845 hADV38S2A0JD32 116 aa16.04■□□□□ 0.16
PHF1-208ENST00000486845 PRR32B1ATL7 298 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms