RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GMFBP60983 142 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 SEC61A1P61619 476 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 SRSF4Q08170 494 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 HLXQ14774 488 aaPredicted RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 GRK1Q15835 563 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 OVCH2Q7RTZ1 564 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 PEG10Q86TG7 708 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 MDP1Q86V88 176 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 CALHM1Q8IU99 346 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 FBXL14Q8N1E6 418 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 NAXEQ8NCW5 288 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 SARAFQ96BY9 339 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 M0R233 179 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 GEMIN2O14893 280 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 DUS4LO95620 317 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 HLA-GP17693 338 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 VAMP1P23763 118 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 DTYMKP23919 212 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 NPY4RP50391 375 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 RBM11P57052 281 aaKnown RBP17.54■□□□□ 0.4
HPS3-206ENST00000486530 TGFBR3Q03167 851 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 CEACAM21Q3KPI0 293 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 PIGYQ3MUY2 71 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 ZNF680Q8NEM1 530 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 SLC30A7Q8NEW0 376 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 TMEM185AQ8NFB2 350 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 OR5L1Q8NGL2 311 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 OR13G1Q8NGZ3 307 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 MAFIPQ8WZ33 124 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 WBP1Q96G27 269 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 FAAP24Q9BTP7 215 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 AK3Q9UIJ7 227 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 OSGIN2Q9Y236 505 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 ST3GAL6Q9Y274 331 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 DOCK7Q96N67 2140 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 RRP8O43159 456 aaKnown RBP17.53■□□□□ 0.4
HPS3-206ENST00000486530 PPP3CBP16298 524 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 CXCL2P19875 107 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 WNT5AP41221 380 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 GUSBP1Q15486 140 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 TMEM128Q5BJH2 165 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 SLC25A26Q70HW3 274 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 FAM214BQ7L5A3 538 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 CCDC36Q8IYA8 594 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 SAXO1Q8IYX7 474 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 OR10AD1Q8NGE0 317 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 HPSE2Q8WWQ2 592 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 ZNF75AQ96N20 296 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 CMSS1Q9BQ75 279 aaKnown RBP17.53■□□□□ 0.4
HPS3-206ENST00000486530 C5orf66Q9H5L9 145 aa17.53■□□□□ 0.4
HPS3-206ENST00000486530 MCRIP1C9JLW8 97 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 ZNHIT1O43257 154 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 CD8AP01732 235 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 NSUN5P2Q63ZY6 315 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 ZADH2Q8N4Q0 377 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 Q8NFD4 153 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 HDHD3Q9BSH5 251 aaPredicted RBP17.52■□□□□ 0.4
HPS3-206ENST00000486530 DPCDQ9BVM2 203 aaPredicted RBP17.52■□□□□ 0.4
HPS3-206ENST00000486530 PLSCR2Q9NRY7 297 aa17.52■□□□□ 0.4
HPS3-206ENST00000486530 RFPL4AA6NLU0 287 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 CD300LBA8K4G0 201 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 RFPL4AL1F8VTS6 287 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 J3QW42 95 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 SDCBPO00560 298 aaPredicted RBP17.52■□□□□ 0.39
HPS3-206ENST00000486530 PDCD6O75340 191 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 MPC2O95563 127 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 ECI1P42126 302 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 ARPC4P59998 168 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 FGL1Q08830 312 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 OPCMLQ14982 345 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 SURF2Q15527 256 aaPredicted RBP17.52■□□□□ 0.39
HPS3-206ENST00000486530 TBC1D28Q2M2D7 210 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 AADACL3Q5VUY0 350 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 GCNT2Q8N0V5 402 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 SULT4A1Q9BR01 284 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 ANXA10Q9UJ72 324 aa17.52■□□□□ 0.39
HPS3-206ENST00000486530 LOC400499M0QZD8 3231 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FXYD6-FXYD2A0A087WZ82 144 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A10PA6NDY2 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A18PA6NE21 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A16PA6NEW6 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A20PA6NIJ5 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A8PA6NJQ4 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A7PA6NKC0 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A22PA8MWA6 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A12PA8MX19 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A5PA8MXJ8 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A23PA8MXZ1 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 CNOT4O95628 575 aaKnown RBP17.51■□□□□ 0.39
HPS3-206ENST00000486530 IFNA7P01567 189 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A15PP0C7V4 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A13PP0C7W8 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A14PP0C7W9 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FAM90A24PP0C7X0 464 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 IGHV1-2P23083 117 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 OR5A2Q8NGI9 324 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 CASTOR1Q8WTX7 329 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 SCNM1Q9BWG6 230 aa17.51■□□□□ 0.39
HPS3-206ENST00000486530 FGF23Q9GZV9 251 aaPredicted RBP17.51■□□□□ 0.39
HPS3-206ENST00000486530 FXYD6Q9H0Q3 95 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms