RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RCVRNP35243 200 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 CCR6P51684 374 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 RAG2P55895 527 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 PPP1CBP62140 327 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 PDZK1IP1Q13113 114 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 AKAP14Q86UN6 197 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 ZSCAN4Q8NAM6 433 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 OR5A2Q8NGI9 324 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 OR10K1Q8NGX5 313 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 RNF170Q96K19 258 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 OR51B6Q9H340 312 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 NUDT15Q9NV35 164 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 ITPR2Q14571 2701 aa12.51□□□□□ -0.41
POLR2J3-204ENST00000486319 PQLC2LA1A4F0 135 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 MEIS3P1A6NDR6 274 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 A8MXE2 369 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 SOCS1O15524 211 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 SPRY1O43609 319 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 HTR3BO95264 441 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 CYB5AP00167 134 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 GNB3P16520 340 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 PSMB1P20618 241 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 RAD52P43351 418 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 UCP2P55851 309 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 GNG2P59768 71 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 CARTPTQ16568 116 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 TIMM23BQ5SRD1 257 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 SFRP4Q6FHJ7 346 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF474Q6S9Z5 364 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 C1orf174Q8IYL3 243 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 OR56B4Q8NH76 319 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 HPS1Q92902 700 aa12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 HEATR1Q9H583 2144 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-204ENST00000486319 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 A0A0B4J293 547 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 HMX3A6NHT5 357 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 FOXI3A8MTJ6 420 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 ANGPTL7O43827 346 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 PLATP00750 562 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 H2AFB2P0C5Z0 115 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF35P13682 527 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 RAC2P15153 192 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 SELEP16581 610 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 TMEM50BP56557 158 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 TLE4Q04727 773 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 PLAC9Q5JTB6 97 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 STEAP1BQ6NZ63 245 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 Q96M66 194 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 C1QTNF6Q9BXI9 259 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 NOP16Q9Y3C1 178 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 SLC25A15Q9Y619 301 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 ALG5Q9Y673 324 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 HCFC1P51610 2035 aa12.49□□□□□ -0.41
POLR2J3-204ENST00000486319 OR5B21A6NL26 309 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 MFNGO00587 321 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 AKR7A2O43488 359 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 CECR9P0C854 216 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 BLVRBP30043 206 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 CBX5P45973 191 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 SORDQ00796 357 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 PPA1Q15181 289 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 C3orf36Q3SXR2 165 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 TMEM255AQ5JRV8 349 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF782Q6ZMW2 699 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF611Q8N823 705 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 OR51F2Q8NH61 342 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 HPSE2Q8WWQ2 592 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 BCL2L14Q9BZR8 327 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 CRIM1Q9NZV1 1036 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 DCHS2Q6V1P9 2916 aa12.48□□□□□ -0.41
POLR2J3-204ENST00000486319 IGKV1-12A0A0C4DH73 117 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 ZNF732B4DXR9 585 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 CA11O75493 328 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 IGKV1D-12P01611 117 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 CD74P04233 296 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 CD3DP04234 171 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 MEF2DQ14814 521 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
POLR2J3-204ENST00000486319 TMEM200AQ86VY9 491 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms