RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 IL17RELQ6ZVW7 336 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 ZNF367Q7RTV3 350 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 SATL1Q86VE3 508 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 SVOPQ8N4V2 548 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 FAM216BQ8N7L0 139 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 ST8SIA4Q92187 359 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 C12orf43Q96C57 262 aaKnown RBP9.87□□□□□ -0.83
HPS4-214ENST00000485842 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 GPER1Q99527 375 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 NKX3-1Q99801 234 aaPredicted RBP9.87□□□□□ -0.83
HPS4-214ENST00000485842 NRIP2Q9BQI9 281 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 YTHDF1Q9BYJ9 559 aaKnown RBP9.87□□□□□ -0.83
HPS4-214ENST00000485842 SMURF1Q9HCE7 757 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4Q9UBX2 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 OR14J1Q9UGF5 321 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 NSD1Q96L73 2696 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 TRBV5-7A0A0A0MS05 114 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 A0A0G2JMP0 313 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 A0A0X1KG70 313 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 A8MXK9 166 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 ZNF879B4DU55 563 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 TRAPPC2LH3BP13 241 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 DVL1O14640 695 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 TNFRSF13BO14836 293 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 MAGEB3O15480 346 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 ANGPTL7O43827 346 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 NOS1APO75052 506 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 CD1AP06126 327 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 PSG2P11465 335 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 SELLP14151 372 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 PCMT1P22061 227 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 CPT2P23786 658 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 MAPK3P27361 379 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 CEBPDP49716 269 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 MLLT11Q13015 90 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 INSL4Q14641 139 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 KISS1Q15726 138 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 DDI2Q5TDH0 399 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 DCAF12L2Q5VW00 463 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 FAHD2BQ6P2I3 314 aaPredicted RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 SLC36A1Q7Z2H8 476 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 MKXQ8IYA7 352 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 FGFRL1Q8N441 504 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 OR4M2Q8NGB6 313 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 ANGPTL6Q8NI99 470 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 EMG1Q92979 244 aaKnown RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 FAHD2AQ96GK7 314 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 GAFA1Q96PS6 74 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 DERL3Q96Q80 235 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 MGLLQ99685 303 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 ACOT13Q9NPJ3 140 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 RASL12Q9NYN1 266 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 KAAG1Q9UBP8 84 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 CKLFQ9UBR5 152 aa9.86□□□□□ -0.83
HPS4-214ENST00000485842 FN1P02751 2386 aaKnown RBP9.86□□□□□ -0.83
HPS4-214ENST00000485842 WNK2Q9Y3S1 2297 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 IGKV1D-17A0A075B6S4 117 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TRAV8-7A0A075B6U6 113 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 RFPL4AA6NLU0 287 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 RFPL4AL1F8VTS6 287 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 F8VVB4 439 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 F8VWA3 439 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 NDUFB3O43676 98 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 MRPS14O60783 128 aaKnown RBP9.85□□□□□ -0.83
HPS4-214ENST00000485842 ALX3O95076 343 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TMEM225BP0DP42 221 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 CALCBP10092 127 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 FSTP19883 344 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 AMY2BP19961 511 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 BCL3P20749 454 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 HNF1AP20823 631 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 BDKRB2P30411 391 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TGFBR2P37173 567 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 NPY4RP50391 375 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 SNU13P55769 128 aaKnown RBP9.85□□□□□ -0.83
HPS4-214ENST00000485842 ERVK11-1P61568 191 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 RPS25P62851 125 aaKnown RBP9.85□□□□□ -0.83
HPS4-214ENST00000485842 IL13RA1P78552 427 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 EMX1Q04741 257 aaPredicted RBP9.85□□□□□ -0.83
HPS4-214ENST00000485842 PDZK1IP1Q13113 114 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 FAM120AOSQ5T036 256 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 ZNF529Q6P280 563 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 CRIP3Q6Q6R5 217 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 ZNF841Q6ZN19 808 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 MS4A15Q8N5U1 240 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TMEM185AQ8NFB2 350 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 OR52N4Q8NGI2 321 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 THRSPQ92748 146 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TMEM203Q969S6 136 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 CPNE2Q96FN4 548 aaPredicted RBP9.85□□□□□ -0.83
HPS4-214ENST00000485842 FAM192AQ9GZU8 254 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 ISYNA1Q9NPH2 558 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 NOX4Q9NPH5 578 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 TMEM138Q9NPI0 162 aa9.85□□□□□ -0.83
HPS4-214ENST00000485842 RBFOX1Q9NWB1 397 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms