RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CCRL2O00421 344 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SLC22A2O15244 555 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SHBGP04278 402 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 OR8U8P0C7N1 319 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 IFI30P13284 250 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ARSBP15848 533 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF823P16415 610 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 HTR1DP28221 377 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 RBM34P42696 430 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SLC9A3P48764 834 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 RPL14P50914 215 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 UCP3P55916 312 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 TAS2R41P59536 307 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 RPS16P62249 146 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ACTA2P62736 377 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ACTG2P63267 376 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ACTC1P68032 377 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ACTA1P68133 377 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 RFX4Q33E94 735 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 ASPHD1Q5U4P2 390 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 AGBL2Q5U5Z8 902 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 LCN8Q6JVE9 175 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SLC18B1Q6NT16 456 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 KCTD8Q6ZWB6 473 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 TRMT10CQ7L0Y3 403 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 HAPLN4Q86UW8 402 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 LYPD6Q86Y78 171 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 CALHM1Q8IU99 346 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 FOXRED2Q8IWF2 684 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 OR6V1Q8N148 313 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 STPG2Q8N412 459 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 CYB561A3Q8NBI2 242 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 OR6Q1Q8NGQ2 317 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 OR10Z1Q8NGY1 313 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 C4orf3Q8WVX3 66 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 GTF2H4Q92759 462 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 EME1Q96AY2 570 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 BPIFA2Q96DR5 249 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SDSLQ96GA7 329 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 APOPT1Q96IL0 206 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 C20orf27Q9GZN8 174 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 NUAK2Q9H093 628 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 HIPK2Q9H2X6 1198 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 WDR55Q9H6Y2 383 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 PNRC2Q9NPJ4 139 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 PAPOLBQ9NRJ5 636 aaKnown RBP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 SLC25A37Q9NYZ2 338 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTPN4-210ENST00000485247 RIMS3Q9UJD0 308 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 MOB4Q9Y3A3 225 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 HSPE1-MOB4S4R3N1 261 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 KIAA2026Q5HYC2 2103 aa4.1□□□□□ -1.75
PTPN4-210ENST00000485247 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 IGHV2-26A0A0B4J1V2 119 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 MAGEA13PA6NCF6 341 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 RFPL4AA6NLU0 287 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 C12orf77C9JDV5 145 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 RFPL4AL1F8VTS6 287 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SLC1A7O00341 560 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 DCTN6O00399 190 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OVOL1O14753 267 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 AHCYL1O43865 530 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SPAG7O75391 227 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 BPGMP07738 259 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 CD14P08571 375 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SPARCP09486 303 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF728P0DKX0 622 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SLC2A1P11166 492 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 PPIFP30405 207 aaKnown RBP4.09□□□□□ -1.75
PTPN4-210ENST00000485247 DDOSTP39656 456 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SLC7A2P52569 658 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SSBP2P81877 361 aaPredicted RBP4.09□□□□□ -1.75
PTPN4-210ENST00000485247 CBX1P83916 185 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 GPR50Q13585 617 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 KRR1Q13601 381 aaKnown RBP4.09□□□□□ -1.75
PTPN4-210ENST00000485247 FHL1Q13642 323 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 GPR139Q6DWJ6 353 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SUMO4Q6EEV6 95 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 NANOGP8Q6NSW7 305 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SLC35E3Q7Z769 313 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OAFQ86UD1 273 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 MSRB3Q8IXL7 192 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 LINC00471Q8N535 108 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 FAM71E2Q8N5Q1 922 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 CD177Q8N6Q3 437 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF676Q8N7Q3 588 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR4P4Q8NGL7 312 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR9I1Q8NGQ6 314 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR1N2Q8NGR9 330 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR13C2Q8NGS9 318 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR2AJ1Q8NGZ0 328 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SCARB1Q8WTV0 552 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 DCUN1D4Q92564 292 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 SPTSSAQ969W0 71 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 TSSK2Q96PF2 358 aa4.09□□□□□ -1.75
PTPN4-210ENST00000485247 OR5B12Q96R08 314 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms