RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 A0A1W2PR64 198 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 A0A1W2PRV1 198 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 ACOD1A6NK06 481 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 ADARB2-AS1A8MUL3 147 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 CHST1O43916 411 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 FBXO24O75426 580 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 MTRF1O75570 445 aaKnown RBP10.54□□□□□ -0.72
HDAC6-227ENST00000485102 RHBDL1O75783 438 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 ATP6V1B1P15313 513 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 GABRA2P47869 451 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 GMFBP60983 142 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 SNRPGP62308 76 aaKnown RBP10.54□□□□□ -0.72
HDAC6-227ENST00000485102 LRRC36Q1X8D7 754 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 CEACAM21Q3KPI0 293 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-227ENST00000485102 EGFL6Q8IUX8 553 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 ERI1Q8IV48 349 aaKnown RBP10.54□□□□□ -0.72
HDAC6-227ENST00000485102 MKXQ8IYA7 352 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 FAM81AQ8TBF8 368 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 OTULINQ96BN8 352 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 LYZL4Q96KX0 146 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 SLC29A1Q99808 456 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF702PQ9H963 129 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 FAM118AQ9NWS6 357 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 CLN6Q9NWW5 311 aa10.54□□□□□ -0.72
HDAC6-227ENST00000485102 A0A0U1RQV5 110 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 MITFO75030 526 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 TFF1P04155 84 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 LYNP07948 512 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 VSIG10L2P0DP72 767 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 FAHP16930 419 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 CAPGP40121 348 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 MAP2K3P46734 347 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 GPM6AP51674 278 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 MED21Q13503 144 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 GFOD2Q3B7J2 385 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 LPCAT4Q643R3 524 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 THAP5Q7Z6K1 395 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 C8orf59Q8N0T1 100 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 FAM185AQ8N0U4 392 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 ZNF561Q8N587 486 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 IQCF1Q8N6M8 205 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 TCEANCQ8N8B7 351 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 AQP3Q92482 292 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 ADI1Q9BV57 179 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 ELL3Q9HB65 397 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 BRD7Q9NPI1 651 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 C19orf12Q9NSK7 152 aa10.53□□□□□ -0.72
HDAC6-227ENST00000485102 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-227ENST00000485102 FAM183AA6NL82 134 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-227ENST00000485102 ATP6V1E1P36543 226 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 DYNLT3P51808 116 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 LGALS4P56470 323 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 ZIK1Q3SY52 487 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-227ENST00000485102 ZBTB37Q5TC79 503 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 PLBD1Q6P4A8 553 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 DEGS2Q6QHC5 323 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 MEPCEQ7L2J0 689 aaKnown RBP10.52□□□□□ -0.73
HDAC6-227ENST00000485102 CPOQ8IVL8 374 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 OR8B12Q8NGG6 310 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 HAVCR2Q8TDQ0 301 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 CYGBQ8WWM9 190 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 SGCDQ92629 289 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 PHF21AQ96BD5 680 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 R3HDM4Q96D70 268 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 MALSU1Q96EH3 234 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 IL4I1Q96RQ9 567 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 MMP28Q9H239 520 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 PITPNC1Q9UKF7 332 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 RAB26Q9ULW5 256 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 RPL36Q9Y3U8 105 aaKnown RBP10.52□□□□□ -0.73
HDAC6-227ENST00000485102 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.73
HDAC6-227ENST00000485102 DSCAML1Q8TD84 2053 aa10.52□□□□□ -0.73
HDAC6-227ENST00000485102 A6NDX4 124 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 RFPL4AA6NLU0 287 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 RFPL4AL1F8VTS6 287 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 IGLV3-1P01715 115 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 RBP4P02753 201 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 CD28P10747 220 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 ALOX5APP20292 161 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 HTR1FP30939 366 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 BMXP51813 675 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 ERVFRD-1P60508 538 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 ACTC1P68032 377 aa10.51□□□□□ -0.73
HDAC6-227ENST00000485102 ACTA1P68133 377 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms