RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 GJE1A6NN92 205 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 M0R036 132 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 MPZL2O60487 215 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 SNX3O60493 162 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KCNK2O95069 426 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ANGPTL1O95841 491 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 SHBGP04278 402 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 C8BP07358 591 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 BCKDHAP12694 445 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 IRF2P14316 349 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 RPL13AP40429 203 aaKnown RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PAX2Q02962 417 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PLPPR5Q32ZL2 321 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 LPCAT4Q643R3 524 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 DMKNQ6E0U4 476 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 C16orf47Q6ZP98 133 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 DNM1P46Q6ZS02 220 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 IFNEQ86WN2 208 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 TGIF2LYQ8IUE0 185 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KRTAP1-3Q8IUG1 177 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 DYRK2Q92630 601 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 TMBIM1Q969X1 311 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 EME1Q96AY2 570 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 RNF183Q96D59 192 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 CCDC115Q96NT0 180 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 DOK1Q99704 481 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PTGES2Q9H7Z7 377 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 FGF20Q9NP95 211 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KRCC1Q9NPI7 259 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ST6GALNAC2Q9UJ37 374 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KLHL21Q9UJP4 597 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 TRBV9A0A0B4J1U6 114 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 UBE2QL1A1L167 161 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 FAM166BA8MTA8 275 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 H3BTX0 84 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF195O14628 629 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 SH2D1BO14796 132 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 FGF16O43320 207 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 EIF1BO60739 113 aaKnown RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ATP5LO75964 103 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 IGKV1D-16P01601 117 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 SERPINE1P05121 402 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PSMB1P20618 241 aaKnown RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 CAV2P51636 162 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 OR10A3P58181 314 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ESRRGP62508 458 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KLF5Q13887 457 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 OR2G6Q5TZ20 316 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 STUMQ69YW2 141 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ACSM5Q6NUN0 579 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 BTNL3Q6UXE8 466 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 MOB3BQ86TA1 216 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 APRG1Q8IVJ8 170 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 C10orf107Q8IVU9 208 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 C9orf106Q8NAJ2 232 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 OR10X1Q8NGY0 326 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 OR6N2Q8NGY6 317 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 TLCD1Q96CP7 247 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PFDN5Q99471 154 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 MAGIXQ9H6Y5 334 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 MOV10Q9HCE1 1003 aaKnown RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 SLC2A9Q9NRM0 540 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 NOP53Q9NZM5 478 aaKnown RBP4.5□□□□□ -1.69
CCDC39-205ENST00000485055 KLHL13Q9P2N7 655 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 PEX16Q9Y5Y5 336 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 AKAP9Q99996 3911 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 DOPEY2Q9Y3R5 2298 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 KIR2DL5BA0A0G2JN68 375 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 KIR2DL5BA0A0G2JPC4 375 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 LOC102725191A0A1B0GVB3 256 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PSMB11A5LHX3 300 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 CHEK1O14757 476 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 SIGLEC5O15389 551 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ATP4BP51164 291 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 P2RX1P51575 399 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 NCBP2P52298 156 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ID2Q02363 134 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PRKCDQ05655 676 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PSG5Q15238 335 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 EIPR1Q53HC9 387 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ZFP1Q6P2D0 407 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 DNM1P34Q6PK57 102 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 KIR2DL5AQ8N109 375 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 RPRMLQ8N4K4 120 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ZSCAN4Q8NAM6 433 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 OR2AK2Q8NG84 335 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 OR4D10Q8NGI6 311 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 KIR2DL5BQ8NHK3 375 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 ABHD4Q8TB40 342 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 GPR148Q8TDV2 347 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 RNF128Q8TEB7 428 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 SLC25A43Q8WUT9 341 aaPredicted RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 TWIST2Q8WVJ9 160 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 PPCDCQ96CD2 204 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 NEURL3Q96EH8 262 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 HBEGFQ99075 208 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 CNN2Q99439 309 aaKnown RBP4.49□□□□□ -1.69
CCDC39-205ENST00000485055 NOX4Q9NPH5 578 aa4.49□□□□□ -1.69
CCDC39-205ENST00000485055 CTPS2Q9NRF8 586 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms