RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 ANKRD65E5RJM6 399 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.42
HLA-F-226ENST00000484704 CCDC159P0C7I6 412 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 PRKACBP22694 351 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 PRTN3P24158 256 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 PEX2P28328 305 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 PRDX2P32119 198 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 POU3F4P49335 361 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 RBP2P50120 134 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 CCR9P51686 369 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 IL24Q13007 206 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 MED21Q13503 144 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 UBE2V2Q15819 145 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 FDX2Q6P4F2 183 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
HLA-F-226ENST00000484704 C9orf139Q6ZV77 190 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 ZNF561Q8N587 486 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 C3orf56Q8N813 242 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 OR52I1Q8NGK6 324 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
HLA-F-226ENST00000484704 SLAMF9Q96A28 289 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 PELI1Q96FA3 418 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 ELL3Q9HB65 397 aaPredicted RBP12.4□□□□□ -0.42
HLA-F-226ENST00000484704 ESM1Q9NQ30 184 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 SIRT7Q9NRC8 400 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.42
HLA-F-226ENST00000484704 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
HLA-F-226ENST00000484704 IGHV1-69DA0A0B4J2H0 117 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 A0A1W2PPH5 198 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 H0YAE9 185 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 FCN3O75636 299 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 IGHV1-69P01742 117 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 IGHA1P01876 353 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ISG15P05161 165 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 MMP9P14780 707 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ATF1P18846 271 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 MYL12AP19105 171 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 EEF1B2P24534 225 aaKnown RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CEBPDP49716 269 aaPredicted RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 MTCP1P56278 107 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CAV3P56539 151 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 NANOS3P60323 173 aaKnown RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 SMN1Q16637 294 aaKnown RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 DEFB112Q30KQ8 113 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ZNF691Q5VV52 312 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 TMPRSS11AQ6ZMR5 421 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 LHFPL2Q6ZUX7 228 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CALHM1Q8IU99 346 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 MKXQ8IYA7 352 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 HAVCR2Q8TDQ0 301 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 APH1BQ8WW43 257 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 SDSLQ96GA7 329 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 DMRTB1Q96MA1 342 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 ISG20L2Q9H9L3 353 aaKnown RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 CAB39Q9Y376 341 aaPredicted RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 MAB21L2Q9Y586 359 aa12.39□□□□□ -0.43
HLA-F-226ENST00000484704 SOX21Q9Y651 276 aaPredicted RBP12.39□□□□□ -0.43
HLA-F-226ENST00000484704 TRBV23-1A0A0A0MS06 115 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 TMEM212A6NML5 194 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 NOS1APO75052 506 aaPredicted RBP12.38□□□□□ -0.43
HLA-F-226ENST00000484704 CLIC3O95833 236 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 KNG1P01042 644 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 AZGP1P25311 298 aaKnown RBP12.38□□□□□ -0.43
HLA-F-226ENST00000484704 COMPP49747 757 aaPredicted RBP12.38□□□□□ -0.43
HLA-F-226ENST00000484704 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 UTS2BQ765I0 119 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 EGFL6Q8IUX8 553 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 ASCC1Q8N9N2 400 aaKnown RBP12.38□□□□□ -0.43
HLA-F-226ENST00000484704 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 DNAAF1Q8NEP3 725 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 OR5AK2Q8NH90 309 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
HLA-F-226ENST00000484704 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 ZNF222Q9UK12 451 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 DHDHQ9UQ10 334 aa12.38□□□□□ -0.43
HLA-F-226ENST00000484704 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 OR4C45A6NMZ5 311 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 HOXA3O43365 443 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-226ENST00000484704 CRYBA1P05813 215 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 HCKP08631 526 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 MPZP25189 248 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 DCKP27707 260 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 IL18R1Q13478 541 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 Q8IYB0 196 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-226ENST00000484704 CD177Q8N6Q3 437 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 OR13C9Q8NGT0 318 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
HLA-F-226ENST00000484704 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms