RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 R4GMQ9 66 aa5.09□□□□□ -1.59
PTCD3-215ENST00000484203 CUBNO60494 3623 aa5.09□□□□□ -1.59
PTCD3-215ENST00000484203 CCDC182A6NF36 153 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR2AT4A6NND4 320 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF732B4DXR9 585 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 H3BUI4 141 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 SLC1A7O00341 560 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 PRKYO43930 277 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 NOS1APO75052 506 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-215ENST00000484203 GATBO75879 557 aaKnown RBP5.08□□□□□ -1.6
PTCD3-215ENST00000484203 NDUFA7O95182 113 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 PAHP00439 452 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 LPLP06858 475 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 FBP1P09467 338 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 IGHV4-38-2P0DP08 117 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 MMP9P14780 707 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 GLRA1P23415 457 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ACKR3P25106 362 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 GPM6AP51674 278 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 CXCR4P61073 352 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ARF6P62330 175 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 CSNK2BP67870 215 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ACTC1P68032 377 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ACTA1P68133 377 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ICAM4Q14773 271 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 SLC25A30Q5SVS4 291 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 MEDAGQ5VYS4 303 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 TMEM236Q5W0B7 351 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 PLCXD3Q63HM9 321 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 C12orf73Q69YU5 71 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 STUMQ69YW2 141 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 GDPGP1Q6ZNW5 385 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF788Q6ZQV5 615 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF826PQ6ZT77 177 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 FAM220AQ7Z4H9 259 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 C11orf53Q8IXP5 236 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 SLC35F2Q8IXU6 374 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 Q8IYB0 196 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ELMOD2Q8IZ81 293 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 HS3ST5Q8IZT8 346 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF561Q8N587 486 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 TCEANCQ8N8B7 351 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 BBS1Q8NFJ9 593 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR5R1Q8NH85 324 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ANGPTL6Q8NI99 470 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR51E1Q8TCB6 317 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 HAVCR2Q8TDQ0 301 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR14A2Q96R54 314 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 AMELYQ99218 206 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 CCL13Q99616 98 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 DCTN5Q9BTE1 182 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 GABARAPL3Q9BY60 117 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 FAM234AQ9H0X4 552 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 SIRPDQ9H106 197 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR51I2Q9H344 312 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF696Q9H7X3 374 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 PLEKHA1Q9HB21 404 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ZNF319Q9P2F9 582 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 ONECUT1Q9UBC0 465 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 CTSZQ9UBR2 303 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 SLC25A10Q9UBX3 287 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-215ENST00000484203 OR52A1Q9UKL2 312 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 PIGLQ9Y2B2 252 aa5.08□□□□□ -1.6
PTCD3-215ENST00000484203 CENPVL3A0A0U1RRI6 287 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 A0A1W2PQ09 198 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 C5orf63A6NC05 138 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 ANKRD61A6NGH8 418 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 METTL15A6NJ78 407 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 J3QT63 122 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 HOXA3O43365 443 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 AKR7A2O43488 359 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 SPRY1O43609 319 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 MPZL2O60487 215 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 CYB5AP00167 134 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 IGLV3-1P01715 115 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 MRPL3P09001 348 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 UBCP0CG48 685 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 NDUFB7P17568 137 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 GABRA2P47869 451 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 UBE2E1P51965 193 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 FUT6P51993 359 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 LGALS4P56470 323 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 SCAND1P57086 179 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 CD69Q07108 199 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 MRPL28Q13084 256 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 AANATQ16613 207 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 DEFB112Q30KQ8 113 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 MIDNQ504T8 468 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 TMEM42Q69YG0 159 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 C11orf88Q6PI97 169 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 HAGHLQ6PII5 290 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 FIP1L1Q6UN15 594 aaKnown RBP5.07□□□□□ -1.6
PTCD3-215ENST00000484203 C17orf107Q6ZR85 190 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 Q6ZSR3 168 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 CCDC121Q6ZUS5 278 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 MOB3CQ70IA8 216 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 WDR86Q86TI4 376 aa5.07□□□□□ -1.6
PTCD3-215ENST00000484203 LDLRAD3Q86YD5 345 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms