RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 FAM151AQ8WW52 585 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 TCEAL3Q969E4 200 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SUCNR1Q9BXA5 334 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SLC25A39Q9BZJ4 359 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 TPK1Q9H3S4 243 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SLCO1B3Q9NPD5 702 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 MRPL40Q9NQ50 206 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 VNN3Q9NY84 501 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF226Q9NYT6 803 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 KLK13Q9UKR3 277 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SIGLEC7Q9Y286 467 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 F11RQ9Y624 299 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 CAMTA1Q9Y6Y1 1673 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 WDR62O43379 1518 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF608Q9ULD9 1512 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 PDS5BQ9NTI5 1447 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 TNRQ92752 1358 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 OR5K4A6NMS3 321 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 ZG16O60844 167 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 TNNC2P02585 160 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 IL6P05231 212 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 FABP1P07148 127 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF17P17021 662 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 PSMB1P20618 241 aaKnown RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 GABRR1P24046 479 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 DRD3P35462 400 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 CYB561P49447 251 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 DIO3P55073 304 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 TIMM10P62072 90 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 PRDX1Q06830 199 aaKnown RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 C16orf72Q14CZ0 275 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 CLEC12AQ5QGZ9 265 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 TNFAIP8L2Q6P589 184 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 FAM131AQ6UXB0 335 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 FBXW12Q6X9E4 464 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 SPNS3Q6ZMD2 512 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 RNF165Q6ZSG1 346 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 RIMKLAQ8IXN7 391 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 GATD1Q8NB37 220 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 OR4P4Q8NGL7 312 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 HAVCR2Q8TDQ0 301 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 CASTOR1Q8WTX7 329 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 AP3S1Q92572 193 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 RPUSD4Q96CM3 377 aaKnown RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 MRPL48Q96GC5 212 aaKnown RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 QKIQ96PU8 341 aaKnown RBP eCLIP3.3□□□□□ -1.881e-11■■■■■ 28.1
PTCD3-214ENST00000483925 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 MS4A6AQ9H2W1 248 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 GNB4Q9HAV0 340 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-214ENST00000483925 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 ARL5AQ9Y689 179 aa3.3□□□□□ -1.88
PTCD3-214ENST00000483925 POGZQ7Z3K3 1410 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ANKRD30AQ9BXX3 1397 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 MN1Q10571 1320 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TRAV8-2A0A0B4J237 113 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 RBFOX3A6NFN3 312 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 KPNA3O00505 521 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 EDIL3O43854 480 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CNMDO75829 334 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 MOSP00540 346 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SERPINA1P01009 418 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CGAP01215 116 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TRBV12-3P01733 135 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 OR4E1P0C645 316 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 UCHL3P15374 230 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF30P17039 623 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TAC1P20366 129 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CFL1P23528 166 aaKnown RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 RPL12P30050 165 aaKnown RBP3.29□□□□□ -1.88
PTCD3-214ENST00000483925 PYCR1P32322 319 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CD70P32970 193 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 MAGEA12P43365 314 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SULT1A1P50225 295 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SULT1A2P50226 295 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 PPOXP50336 477 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SLC18A1P54219 525 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CDKN2DP55273 166 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ARPC4P59998 168 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 GINS1Q14691 196 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 HERPUD1Q15011 391 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SHHQ15465 462 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ATP6AP1LQ52LC2 224 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TMEM236Q5W0B7 351 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 FBXW9Q5XUX1 488 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SAXO2Q658L1 398 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 PLET1Q6UQ28 207 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 CLEC19AQ6UXS0 136 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ACTRT1Q8TDG2 376 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 ASB13Q8WXK3 278 aa3.29□□□□□ -1.88
PTCD3-214ENST00000483925 TMEM159Q96B96 161 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms