RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 PEX14O75381 377 aa12□□□□□ -0.49
CLK3-204ENST00000483723 CCNKO75909 580 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 TBPP20226 339 aa12□□□□□ -0.49
CLK3-204ENST00000483723 BMP5P22003 454 aa12□□□□□ -0.49
CLK3-204ENST00000483723 CA6P23280 308 aa12□□□□□ -0.49
CLK3-204ENST00000483723 CHATP28329 748 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MPV17P39210 176 aa12□□□□□ -0.49
CLK3-204ENST00000483723 PMELP40967 661 aa12□□□□□ -0.49
CLK3-204ENST00000483723 HAAOP46952 286 aa12□□□□□ -0.49
CLK3-204ENST00000483723 NPBWR2P48146 333 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM27E3Q08E93 113 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MEF2DQ14814 521 aa12□□□□□ -0.49
CLK3-204ENST00000483723 RBMS2Q15434 407 aaKnown RBP12□□□□□ -0.49
CLK3-204ENST00000483723 TAF9Q16594 264 aa12□□□□□ -0.49
CLK3-204ENST00000483723 ALKBH6Q3KRA9 238 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MBNL2Q5VZF2 373 aaKnown RBP12□□□□□ -0.49
CLK3-204ENST00000483723 FBXL14Q8N1E6 418 aa12□□□□□ -0.49
CLK3-204ENST00000483723 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
CLK3-204ENST00000483723 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
CLK3-204ENST00000483723 OR8S1Q8NH09 359 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FBXW5Q969U6 566 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MUCL1Q96DR8 90 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MED30Q96HR3 178 aa12□□□□□ -0.49
CLK3-204ENST00000483723 ST6GAL2Q96JF0 529 aa12□□□□□ -0.49
CLK3-204ENST00000483723 VKORC1Q9BQB6 163 aa12□□□□□ -0.49
CLK3-204ENST00000483723 TINAGL1Q9GZM7 467 aaPredicted RBP12□□□□□ -0.49
CLK3-204ENST00000483723 OR10A4Q9H209 315 aa12□□□□□ -0.49
CLK3-204ENST00000483723 SLC2A8Q9NY64 477 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MTCH1Q9NZJ7 389 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FLVCR2Q9UPI3 526 aa12□□□□□ -0.49
CLK3-204ENST00000483723 MAP1BP46821 2468 aaKnown RBP12□□□□□ -0.49
CLK3-204ENST00000483723 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
CLK3-204ENST00000483723 A0A1B0GWJ7 208 aa12□□□□□ -0.49
CLK3-204ENST00000483723 PRAF2O60831 178 aa12□□□□□ -0.49
CLK3-204ENST00000483723 IL5P05113 134 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FCER2P06734 321 aa12□□□□□ -0.49
CLK3-204ENST00000483723 GABRR1P24046 479 aa12□□□□□ -0.49
CLK3-204ENST00000483723 RBM11P57052 281 aaKnown RBP12□□□□□ -0.49
CLK3-204ENST00000483723 RRAS2P62070 204 aaPredicted RBP12□□□□□ -0.49
CLK3-204ENST00000483723 IL24Q13007 206 aa12□□□□□ -0.49
CLK3-204ENST00000483723 ARFRP1Q13795 201 aa12□□□□□ -0.49
CLK3-204ENST00000483723 TMEM211Q6ICI0 200 aa12□□□□□ -0.49
CLK3-204ENST00000483723 SEZ6L2Q6UXD5 910 aa12□□□□□ -0.49
CLK3-204ENST00000483723 HOGA1Q86XE5 327 aa12□□□□□ -0.49
CLK3-204ENST00000483723 RELL2Q8NC24 303 aaPredicted RBP12□□□□□ -0.49
CLK3-204ENST00000483723 SNAPC3Q92966 411 aa12□□□□□ -0.49
CLK3-204ENST00000483723 IFT46Q9NQC8 304 aa12□□□□□ -0.49
CLK3-204ENST00000483723 PURGQ9UJV8 347 aaKnown RBP12□□□□□ -0.49
CLK3-204ENST00000483723 ST3GAL6Q9Y274 331 aa12□□□□□ -0.49
CLK3-204ENST00000483723 M0QYG6 137 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 GEMIN2O14893 280 aaKnown RBP11.99□□□□□ -0.49
CLK3-204ENST00000483723 BCL3P20749 454 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 FGF12P61328 243 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 ZNF718Q3SXZ3 478 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 C6orf201Q7Z4U5 140 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 OR8G5Q8NG78 346 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 SLC6A7Q99884 636 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 SLC25A21Q9BQT8 299 aaPredicted RBP11.99□□□□□ -0.49
CLK3-204ENST00000483723 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 RHOFQ9HBH0 211 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 NKIRAS2Q9NYR9 191 aa11.99□□□□□ -0.49
CLK3-204ENST00000483723 PRR14LQ5THK1 2151 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 ARPC1BO15143 372 aaKnown RBP11.98□□□□□ -0.49
CLK3-204ENST00000483723 SYNGR1O43759 233 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 ZNF83P51522 516 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 ZMYND11Q15326 602 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 PIGYQ3MUY2 71 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 RNASE10Q5GAN6 216 aaKnown RBP11.98□□□□□ -0.49
CLK3-204ENST00000483723 VAX1Q5SQQ9 334 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 OR52W1Q6IF63 320 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 C22orf34Q6ZV56 151 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 NCCRP1Q6ZVX7 275 aaPredicted RBP11.98□□□□□ -0.49
CLK3-204ENST00000483723 SLC36A1Q7Z2H8 476 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 ST6GALNAC3Q8NDV1 305 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 OR10AD1Q8NGE0 317 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 GIMAP1Q8WWP7 306 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 EMG1Q92979 244 aaKnown RBP11.98□□□□□ -0.49
CLK3-204ENST00000483723 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
CLK3-204ENST00000483723 OR51J1Q9H342 316 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 CACNA1BQ00975 2339 aa11.98□□□□□ -0.49
CLK3-204ENST00000483723 LRP5LA4QPB2 252 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 DISC1C4P0D8 188 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 EEF1E1-BLOC1S5C9J1V9 151 aa11.97□□□□□ -0.49
CLK3-204ENST00000483723 F8VVB4 439 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms