RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 VN1R1Q9GZP7 353 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 OR10A2Q9H208 303 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 CDH20Q9HBT6 801 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 MRPS23Q9Y3D9 190 aaKnown RBP10.35□□□□□ -0.75
VTI1A-205ENST00000483122 CLDN16Q9Y5I7 305 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 MTCH2Q9Y6C9 303 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 MYO7AQ13402 2215 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 PRSS38A1L453 326 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 FAM221AA4D161 298 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 STMND1H3BQB6 276 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 CLPSP04118 112 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 HSPB1P04792 205 aaKnown RBP10.35□□□□□ -0.75
VTI1A-205ENST00000483122 AKT2P31751 481 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 TDGF1P3P51864 188 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 RND2P52198 227 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 PPP1CAP62136 330 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
VTI1A-205ENST00000483122 TMEM187Q14656 261 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 SP5Q6BEB4 398 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-205ENST00000483122 ABLIM2Q6H8Q1 611 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 ZNF880Q6PDB4 577 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 FBXW12Q6X9E4 464 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 C1QL2Q7Z5L3 287 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 ZNF321PQ8N8H1 164 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 OR5D18Q8NGL1 313 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 OR1P1Q8NH06 330 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 BAHD1Q8TBE0 780 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-205ENST00000483122 GPER1Q99527 375 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 LIME1Q9H400 295 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 PADI1Q9ULC6 663 aa10.35□□□□□ -0.75
VTI1A-205ENST00000483122 C5orf42Q9H799 3197 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 PLPP3O14495 311 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 HCRTR2O43614 444 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 NUDT14O95848 222 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 NPSP0C0P6 89 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 JMJD7P0C870 316 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 RAB4AP20338 218 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 BLVRBP30043 206 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 PIGPP57054 158 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 COL10A1Q03692 680 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 CST6Q15828 149 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 OR10S1Q8NGN2 331 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 OR10J5Q8NHC4 309 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 CLDND2Q8NHS1 167 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 SNIP1Q8TAD8 396 aaKnown RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 STT3BQ8TCJ2 826 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 OR1E3Q8WZA6 343 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 SLAMF6Q96DU3 332 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 ADGRG7Q96K78 797 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 URM1Q9BTM9 101 aaKnown RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 A0A1W2PQU0 124 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 FAM221BA6H8Z2 402 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 A6NNC1 897 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 SLC31A1O15431 190 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 AHSA1O95433 338 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 MMP7P09237 267 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 IGFBP4P22692 258 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 CSNK1A1P48729 337 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 RPL23AP62750 156 aaKnown RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 FUT7Q11130 342 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 IL13RA2Q14627 380 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 C2orf27AQ580R0 203 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 KLHL24Q6TFL4 600 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 COMMD2Q86X83 199 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 HAS2Q92819 552 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 TOMM40LQ969M1 308 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 R3HDM4Q96D70 268 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 ADOQ96SZ5 270 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 SYT3Q9BQG1 590 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 CCDC3Q9BQI4 270 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 PRTFDC1Q9NRG1 225 aa10.34□□□□□ -0.75
VTI1A-205ENST00000483122 MCTS1Q9ULC4 181 aaKnown RBP10.34□□□□□ -0.75
VTI1A-205ENST00000483122 ARHGEF17Q96PE2 2063 aaPredicted RBP10.33□□□□□ -0.75
VTI1A-205ENST00000483122 FOXI3A8MTJ6 420 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 CLDN34H7C241 214 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 M0R143 59 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 DFFBO76075 338 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 OMGP23515 440 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 HYAL1Q12794 435 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 RAB35Q15286 201 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 DEGS2Q6QHC5 323 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 OR8G5Q8NG78 346 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 PATE1Q8WXA2 126 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TSACCQ96A04 125 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 BOD1Q96IK1 185 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 NXF5Q9H1B4 397 aaKnown RBP10.33□□□□□ -0.76
VTI1A-205ENST00000483122 CALHM2Q9HA72 323 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 FAM60AQ9NP50 221 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 IL17BQ9UHF5 180 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 TMEM131Q92545 1883 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 IGSF23A1L1A6 192 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 IFNL4K9M1U5 179 aa10.33□□□□□ -0.76
VTI1A-205ENST00000483122 MSTNO14793 375 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms