RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CDRT15Q96T59 188 aa11.8□□□□□ -0.52
HDAC6-224ENST00000481929 EGLN3Q9H6Z9 239 aa11.8□□□□□ -0.52
HDAC6-224ENST00000481929 SCOCQ9UIL1 159 aa11.8□□□□□ -0.52
HDAC6-224ENST00000481929 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
HDAC6-224ENST00000481929 JTBO76095 146 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 GADD45GO95257 159 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 CBX1P83916 185 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 MEF2CQ06413 473 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-224ENST00000481929 TSPAN31Q12999 210 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 KLF10Q13118 480 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 CRMP1Q14194 572 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 RPL13AP3Q6NVV1 102 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 MOB3CQ70IA8 216 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 ERI1Q8IV48 349 aaKnown RBP11.79□□□□□ -0.52
HDAC6-224ENST00000481929 SLC15A3Q8IY34 581 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 OR8U1Q8NH10 309 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 GNPDA2Q8TDQ7 276 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 AMELYQ99218 206 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 NRIP2Q9BQI9 281 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 SIKE1Q9BRV8 207 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 SLC22A13Q9Y226 551 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 POLDIP2Q9Y2S7 368 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 CDH10Q9Y6N8 788 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 HSPE1-MOB4S4R3N1 261 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
HDAC6-224ENST00000481929 SORL1Q92673 2214 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 hADV38S2A0JD32 116 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 J3QT63 122 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 NOS1APO75052 506 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-224ENST00000481929 CLUP10909 449 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 NCK1P16333 377 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 HAAOP46952 286 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 TCF23Q7RTU1 214 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 BATF2Q8N1L9 274 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 OR8B12Q8NGG6 310 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 NMNAT2Q9BZQ4 307 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
HDAC6-224ENST00000481929 LEUTXA8MZ59 168 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 NUDT2P50583 147 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 EDDM3AQ14507 147 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 DEFB136Q30KP8 78 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF260Q3ZCT1 412 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 SHFQ7M4L6 423 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 KRT77Q7Z794 578 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 OR8H2Q8N162 312 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF596Q8TC21 504 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 NIPAL2Q9H841 368 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 HES4Q9HCC6 221 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 DCAF13Q9NV06 445 aaKnown RBP11.77□□□□□ -0.53
HDAC6-224ENST00000481929 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 HYDINQ4G0P3 5121 aa11.77□□□□□ -0.53
HDAC6-224ENST00000481929 NME4O00746 187 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF737O75373 536 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 FRMD6-AS1P0C7T7 363 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 CEACAM3P40198 252 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 MNDAP41218 407 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
HDAC6-224ENST00000481929 BDH1Q02338 343 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF684Q5T5D7 378 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 LINC01590Q5TEZ4 76 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 EGFL6Q8IUX8 553 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 RP9Q8TA86 221 aaKnown RBP11.76□□□□□ -0.53
HDAC6-224ENST00000481929 RCN3Q96D15 328 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 LINC00527Q9UJ94 153 aa11.76□□□□□ -0.53
HDAC6-224ENST00000481929 SIRT4Q9Y6E7 314 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-224ENST00000481929 LYNP07948 512 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 GSTT1P30711 240 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 RIPPLY1Q0D2K3 151 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 RTN4RL2Q86UN3 420 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 COMMD2Q86X83 199 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 ITFG2Q969R8 447 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 KCTD14Q9BQ13 255 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-224ENST00000481929 DCLRE1BQ9H816 532 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 EDA2RQ9HAV5 297 aa11.75□□□□□ -0.53
HDAC6-224ENST00000481929 SAMD4AQ9UPU9 718 aaKnown RBP11.75□□□□□ -0.53
HDAC6-224ENST00000481929 PSMD9O00233 223 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 GSC2O15499 205 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 EDF1O60869 148 aaKnown RBP11.74□□□□□ -0.53
HDAC6-224ENST00000481929 MMP23AO75900 390 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 NRASP01111 189 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 ATP6V1B1P15313 513 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 INSL3P51460 131 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 FAM27D1Q5T7N8 215 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 CCDC144NLQ6NUI1 221 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms