RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 PIGGQ5H8A4 983 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 BAIAP2L2Q6UXY1 529 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 RTL4Q6ZR62 310 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CYP4Z2PQ8N1L4 340 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 GPR137CQ8N3F9 429 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 KIF2BQ8N4N8 673 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 TMEM156Q8N614 296 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 OR4K14Q8NGD5 310 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 OR13F1Q8NGS4 319 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF675Q8TD23 568 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 C10orf105Q8TEF2 133 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 EFHD2Q96C19 240 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 TM4SF18Q96CE8 201 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 HAVCR1Q96D42 359 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 FCRL1Q96LA6 429 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 ZIM3Q96PE6 472 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 SLC38A2Q96QD8 506 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 KIR2DL4Q99706 377 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 IQCGQ9H095 443 aaKnown RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 STMN4Q9H169 189 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CXorf21Q9HAI6 301 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 RRAGDQ9NQL2 400 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 POLE4Q9NR33 117 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 QPCTLQ9NXS2 382 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF629Q9UEG4 869 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF639Q9UID6 485 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF107Q9UII5 783 aaPredicted RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 CES1P1Q9UKY3 287 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 PRPF19Q9UMS4 504 aaKnown RBP3.89□□□□□ -1.79
UPF3A-205ENST00000479712 TMED5Q9Y3A6 229 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 FREM3P0C091 2139 aa3.89□□□□□ -1.79
UPF3A-205ENST00000479712 WNK2Q9Y3S1 2297 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 PINLYPA6NC86 204 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SNTNA6NMZ2 147 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 A8MUA0 341 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 GOLGA8RI6L899 631 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 WWP2O00308 870 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 AZIN1O14977 448 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ACOX3O15254 700 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 BIRC5O15392 142 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 NBR2O15453 112 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 RGS16O15492 202 aaPredicted RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 TIMM8AO60220 97 aaPredicted RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 OR2J2O76002 312 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 LY6HO94772 140 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 GLSO94925 669 aaPredicted RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 LALBAP00709 142 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SERPINA3P01011 423 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 IGHG4P01861 327 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 KLK1P06870 262 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 CNR1P21554 472 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 DEKP35659 375 aaKnown RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 MAP3K8P41279 467 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SLCO1A2P46721 670 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 XKP51811 444 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SLC18A1P54219 525 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SEC61GP60059 68 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 LMO4P61968 165 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 RPL23AP62750 156 aaKnown RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 IFFO1Q0D2I5 559 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF763Q0D2J5 394 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 EBPQ15125 230 aaKnown RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 PRR4Q16378 134 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF791Q3KP31 576 aaPredicted RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 TNFAIP8L3Q5GJ75 292 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 OR2B11Q5JQS5 317 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF774Q6NX45 483 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 SKA3Q8IX90 412 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 LRRC34Q8IZ02 419 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 OR2L13Q8N349 312 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 LRRC25Q8N386 305 aaPredicted RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 RNF175Q8N4F7 328 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 NATD1Q8N6N6 113 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 CCNYL1Q8N7R7 359 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF615Q8N8J6 731 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 PAQR8Q8TEZ7 354 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 C22orf15Q8WYQ4 148 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 TUBGCP3Q96CW5 907 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF681Q96N22 645 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 B9D2Q9BPU9 175 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 OR8D2Q9GZM6 311 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZDHHC11Q9H8X9 412 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 RPUSD1Q9UJJ7 312 aaKnown RBP3.88□□□□□ -1.79
UPF3A-205ENST00000479712 ZNF780BQ9Y6R6 833 aa3.88□□□□□ -1.79
UPF3A-205ENST00000479712 FAM240BA0A1B0GVZ2 78 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 A0A1W2PP18 115 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 H0Y8G0 127 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 TP53I11O14683 189 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 ERLIN1O75477 346 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 ATP5LO75964 103 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 CLPSP04118 112 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 P04436 131 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 BPGMP07738 259 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 IGLL1P15814 213 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 NCF2P19878 526 aaPredicted RBP3.87□□□□□ -1.79
UPF3A-205ENST00000479712 ZP3P21754 424 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 MPIP34949 423 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 PPICP45877 212 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 MEOX2P50222 304 aa3.87□□□□□ -1.79
UPF3A-205ENST00000479712 ATP1B3P54709 279 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms