RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 BLACEA4D250 179 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 RBFOX3A6NFN3 312 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 H0YL77 283 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 PPP1CCP36873 323 aaKnown RBP11.97□□□□□ -0.49
USP42-206ENST00000479544 HAAOP46952 286 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TMEM267Q0VDI3 215 aaPredicted RBP11.97□□□□□ -0.49
USP42-206ENST00000479544 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 GFI1Q99684 422 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 DOK5Q9P104 306 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 CD207Q9UJ71 328 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ZSWIM8A7E2V4 1837 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ZNHIT1O43257 154 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TGOLN2O43493 480 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 NKAIN1Q4KMZ8 207 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 NSUN5P2Q63ZY6 315 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 OR2C3Q8N628 320 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 IL22RA1Q8N6P7 574 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 BCO1Q9HAY6 547 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 DOCK8Q8NF50 2099 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 FIGNL2A6NMB9 653 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 IL11P20809 199 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 OTX2P32243 289 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 PLGLB1Q02325 96 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TGFBR3Q03167 851 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 OR13D1Q8NGV5 346 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 RARRES2Q99969 163 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ARV1Q9H2C2 271 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 DNAJB11Q9UBS4 358 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 V9GYS6 101 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
USP42-206ENST00000479544 TRAV34A0A0B4J273 112 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TRBV5-5A0A0J9YX44 114 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 SPINT1O43278 529 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TMEM127O75204 238 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ZFAND5O76080 213 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TNFRSF4P43489 277 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 ZNF684Q5T5D7 378 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 STPG1Q5TH74 334 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 RTL6Q6ICC9 239 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 KCNIP4Q6PIL6 250 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 WFIKKN1Q96NZ8 548 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 TRAPPC2LQ9UL33 140 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 SLCO1B1Q9Y6L6 691 aa11.97□□□□□ -0.49
USP42-206ENST00000479544 CD200P41217 278 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 PSMB3P49720 205 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 SCAND1P57086 179 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 MYBPHQ13203 477 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 SURF2Q15527 256 aaPredicted RBP11.96□□□□□ -0.49
USP42-206ENST00000479544 CATSPERDQ86XM0 798 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 KIAA2026Q5HYC2 2103 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 ZNF320A2RRD8 509 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 XKRY2A2RUG3 117 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 SEC14L6B5MCN3 397 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 ADAM20O43506 726 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 SPINK4O60575 86 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 CHRNA7P36544 502 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 HBG1P69891 147 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 HBG2P69892 147 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 RPS4Y2Q8TD47 263 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 GNPNAT1Q96EK6 184 aaPredicted RBP11.96□□□□□ -0.49
USP42-206ENST00000479544 DMRTA2Q96SC8 542 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
USP42-206ENST00000479544 OR5H15A6NDH6 313 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 CLDN34H7C241 214 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 CLN5O75503 358 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 FGF7P21781 194 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 AAED1Q7RTV5 226 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 VASH2Q86V25 355 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 MYPOPQ86VE0 399 aaPredicted RBP11.96□□□□□ -0.5
USP42-206ENST00000479544 ARHGEF39Q8N4T4 335 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 CYB561D1Q8N8Q1 229 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 OR8B12Q8NGG6 310 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 IL22RA2Q969J5 263 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 GGACTQ9BVM4 153 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 PLEKHA3Q9HB20 300 aa11.96□□□□□ -0.5
USP42-206ENST00000479544 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.5
USP42-206ENST00000479544 LOC101059948A0A1B0GTJ6 334 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 METTL15P1P0C7V9 234 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 PNLIPP16233 465 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 NTF3P20783 257 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 CD38P28907 300 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 ZNF133P52736 654 aaPredicted RBP11.95□□□□□ -0.5
USP42-206ENST00000479544 TAS2R30P59541 319 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 PDLIM3Q53GG5 364 aaPredicted RBP11.95□□□□□ -0.5
USP42-206ENST00000479544 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
USP42-206ENST00000479544 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 PLPP3O14495 311 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 RAC2P15153 192 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 ZNF808Q8N4W9 903 aaPredicted RBP11.95□□□□□ -0.5
USP42-206ENST00000479544 PLPPR2Q96GM1 343 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 ALKBH3Q96Q83 286 aaPredicted RBP11.95□□□□□ -0.5
USP42-206ENST00000479544 HSPB2A8KAH6 182 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 MSR1P21757 451 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 RNF4P78317 190 aa11.95□□□□□ -0.5
USP42-206ENST00000479544 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms