RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FGFBP3Q8TAT2 258 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF431Q8TF32 576 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 SLAMF6Q96DU3 332 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 RNFT2Q96EX2 444 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 BCL2L14Q9BZR8 327 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 WNT5BQ9H1J7 359 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 GSN-AS1Q9NRJ2 163 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 CENPMQ9NSP4 180 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MRPL22Q9NWU5 206 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 TREM2Q9NZC2 230 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 CNOT2Q9NZN8 540 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MYEF2Q9P2K5 600 aaKnown RBP5.32□□□□□ -1.56
SF3B1-209ENST00000479532 MLXQ9UH92 298 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 LHFPL6Q9Y693 200 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 ALPK2Q86TB3 2170 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 DOPEY1Q5JWR5 2465 aa5.32□□□□□ -1.56
SF3B1-209ENST00000479532 SPTBN1Q01082 2364 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 A0A0B4J293 547 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 IGHV2OR16-5A0A0B4J2B6 119 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 A0A1W2PQ09 198 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DAPL1A0PJW8 107 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DPRXA6NFQ7 191 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DEFB108AA8MXU0 73 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 F5H5K5 113 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 TEX46H3BTG2 121 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DNASE2O00115 360 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 RER1O15258 196 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SYNGR3O43761 229 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 FAM20BO75063 409 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CTAG2O75638 210 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SCO1O75880 301 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CLIC3O95833 236 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 IFNA2P01563 188 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 MT-ND5P03915 603 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 LCKP06239 509 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ANXA2P07355 339 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SBK2P0C263 348 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HSMCR30P0CW71 290 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 PIPP12273 146 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 TUBG1P23258 451 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 PMELP40967 661 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 FABP6P51161 128 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 RORCP51449 518 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 RIDAP52758 137 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 BPIFB3P59826 476 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ACTA2P62736 377 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ACTG2P63267 376 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HIST1H3AP68431 136 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 RAB40BQ12829 278 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SNTB2Q13425 540 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HNF4GQ14541 408 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 IRF3Q14653 427 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF79Q15937 498 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 TIGD6Q17RP2 521 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF672Q499Z4 452 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DDI2Q5TDH0 399 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HIST2H3PS2Q5TEC6 136 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 RGS7BPQ6MZT1 257 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DEGS2Q6QHC5 323 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 B3GLCTQ6Y288 498 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HIST2H3AQ71DI3 136 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 BCDIN3DQ7Z5W3 292 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CDC20BQ86Y33 519 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 OR8H2Q8N162 312 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 FBXL14Q8N1E6 418 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF283Q8N7M2 679 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 NUP37Q8NFH4 326 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 OR10H4Q8NGA5 316 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CNIH3Q8TBE1 160 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ZNRF4Q8WWF5 429 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ORAI1Q96D31 301 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 POM121L2Q96KW2 1035 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 C4orf45Q96LM5 186 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 C7orf50Q9BRJ6 194 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ABHD6Q9BV23 337 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CDCA4Q9BXL8 241 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 MIXL1Q9H2W2 232 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SAV1Q9H4B6 383 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 HEATR1Q9H583 2144 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 UBTD1Q9HAC8 227 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SEBOXQ9HB31 216 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ADGRL4Q9HBW9 690 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 NOX3Q9HBY0 568 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 TUBG2Q9NRH3 451 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 INPP5EQ9NRR6 644 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 MRPS18AQ9NVS2 196 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CISD1Q9NZ45 108 aaKnown RBP5.31□□□□□ -1.56
SF3B1-209ENST00000479532 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 SCP2D1Q9UJQ7 156 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 IKZF2Q9UKS7 526 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 CMAHPQ9Y471 501 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 NUBP2Q9Y5Y2 271 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 DOPEY2Q9Y3R5 2298 aa5.31□□□□□ -1.56
SF3B1-209ENST00000479532 ICE1Q9Y2F5 2266 aa5.3□□□□□ -1.56
SF3B1-209ENST00000479532 PTGES3LE9PB15 166 aa5.3□□□□□ -1.56
SF3B1-209ENST00000479532 M0R135 149 aa5.3□□□□□ -1.56
SF3B1-209ENST00000479532 UBE2CO00762 179 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms