RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	ELL3	Q9HB65	397 aa	Predicted RBP	11.33	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR14J1	Q9UGF5	321 aa		11.33	□□□□□ -0.6
HDAC7-222	ENST00000477937	EXOG	Q9Y2C4	368 aa	Known RBP	11.33	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PPH5	198 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937		H0YAE9	185 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	RNASEK-C17orf49	H0YIS7	233 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	NPFF	O15130	113 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	SLC16A6	O15403	523 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	HTR1A	P08908	422 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	FBP1	P09467	338 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	OMG	P23515	440 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	IER3	P46695	156 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	CEBPD	P49716	269 aa	Predicted RBP	11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	UBE2E1	P51965	193 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR12D2	P58182	307 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	ERVK11-1	P61568	191 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	ACTA2	P62736	377 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	ACTG2	P63267	376 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	PRB3	Q04118	309 aa	Predicted RBP	11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	NCR3LG1	Q68D85	454 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	FDX2	Q6P4F2	183 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	LDLRAD3	Q86YD5	345 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	ENTHD1	Q8IYW4	607 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	FAM185A	Q8N0U4	392 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	BATF2	Q8N1L9	274 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR5D13	Q8NGL4	314 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	DYRK2	Q92630	601 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	RNF166	Q96A37	237 aa	Predicted RBP	11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	BORCS8	Q96FH0	119 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	DPAGT1	Q9H3H5	408 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	HES4	Q9HCC6	221 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	FRRS1L	Q9P0K9	344 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	AASS	Q9UDR5	926 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	ANK2	Q01484	3957 aa		11.32	□□□□□ -0.6
HDAC7-222	ENST00000477937	IGKV1-27	A0A075B6S5	117 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1B0GUS0	222 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	LOC100130705	A0A1B0GUX0	176 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PRD5	423 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PRF3	423 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PRM7	423 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937		J3QLW9	94 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	KNG1	P01042	644 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	IGHV4-59	P01825	116 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	ISG15	P05161	165 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNF19	P17023	458 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	GABRB1	P18505	474 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	CCR9	P51686	369 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	ATP1B3	P54709	279 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	DLX1	P56177	255 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	RPL15	P61313	204 aa	Known RBP	11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	RPL31	P62899	125 aa	Known RBP	11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNF91	Q05481	1191 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	ACSM1	Q08AH1	577 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	KLRD1	Q13241	179 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	CNN3	Q15417	329 aa	Known RBP	11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	RHOXF1	Q8NHV9	184 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	TAF15	Q92804	592 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	TNFRSF14	Q92956	283 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	LGALS12	Q96DT0	336 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	CEP19	Q96LK0	163 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	FAM234A	Q9H0X4	552 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	C19orf12	Q9NSK7	152 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	FAM118A	Q9NWS6	357 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	MTCH1	Q9NZJ7	389 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	MMP24	Q9Y5R2	645 aa		11.31	□□□□□ -0.6
HDAC7-222	ENST00000477937	hCG_1809904	A0A1W2PP81	198 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PPE2	198 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PR64	198 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937		A0A1W2PRV1	198 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	MEIOC	A2RUB1	952 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	BAG2	O95816	211 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	FADS2	O95864	444 aa	Known RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	PAH	P00439	452 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	TK1	P04183	234 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	DBT	P11182	482 aa	Known RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNF20	P17024	532 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	MDK	P21741	143 aa	Predicted RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	RBP2	P50120	134 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	NANOS3	P60323	173 aa	Known RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	GALE	Q14376	348 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	SLC25A26	Q70HW3	274 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	LHFPL3	Q86UP9	236 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	EGFL6	Q8IUX8	553 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	DNAAF1	Q8NEP3	725 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR4F5	Q8NH21	305 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	STMN2	Q93045	179 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	SLAMF9	Q96A28	289 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	FGGY	Q96C11	551 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	ADAT3	Q96EY9	351 aa	Predicted RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	PELI1	Q96FA3	418 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	C4orf36	Q96KX1	117 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	ALG8	Q9BVK2	526 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	BEX1	Q9HBH7	125 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	HHLA2	Q9UM44	414 aa		11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	SF3B6	Q9Y3B4	125 aa	Known RBP	11.3	□□□□□ -0.6
HDAC7-222	ENST00000477937	BTBD17	A6NE02	478 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937		K7N7A8	449 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	GPR137B	O60478	399 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	INMT	O95050	263 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	NDUFA7	O95182	113 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms