RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ACTBL2Q562R1 376 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 TMEM268Q5VZI3 342 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ZNF813Q6ZN06 617 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 SPEM1Q8N4L4 309 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ZNF611Q8N823 705 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 NKAIN3Q8N8D7 197 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ZNF519Q8TB69 540 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 MCTS1Q9ULC4 181 aaKnown RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 ARFGEF3Q5TH69 2177 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 EFNA2O43921 213 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ZNF728P0DKX0 622 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 P2RY4P51582 365 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 FGF8P55075 233 aaPredicted RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 ELLP55199 621 aaPredicted RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 MRPS34P82930 218 aaKnown RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 PJVKQ0ZLH3 352 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 LYSMD4Q5XG99 296 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 EIF5AL1Q6IS14 154 aaKnown RBP8.57□□□□□ -1.04
CMC1-209ENST00000477739 DHRS11Q6UWP2 260 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 SLC25A26Q70HW3 274 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ANKRD37Q7Z713 158 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 RARRES2Q99969 163 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 SCPEP1Q9HB40 452 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 CRLF2Q9HC73 371 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 ABCA4P78363 2273 aa8.57□□□□□ -1.04
CMC1-209ENST00000477739 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 NAT2P11245 290 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PTGER4P35408 488 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PPP1CCP36873 323 aaKnown RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 APOBEC1P41238 236 aaKnown RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 CCL7P80098 99 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 CYCSP99999 105 aaKnown RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 OR9K2Q8NGE7 335 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 MRGPRFQ96AM1 343 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 ZNF488Q96MN9 340 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 AURKAIP1Q9NWT8 199 aaPredicted RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 C19orf25Q9UFG5 118 aaPredicted RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 IAPPP10997 89 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 TESK1Q15569 626 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 UBE2V2Q15819 145 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 C3AR1Q16581 482 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 RHBDD2Q6NTF9 364 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 HIST2H3AQ71DI3 136 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 ST8SIA1Q92185 356 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 HLA-CQ95604 372 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 NRIP2Q9BQI9 281 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 FAM234AQ9H0X4 552 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PRDM6Q9NQX0 595 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 OCIAD1Q9NX40 245 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 THADAQ6YHU6 1953 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 ANKUB1A6NFN9 424 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 LINC00587B1AMM8 73 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 CXCL13O43927 109 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 SFT2D2O95562 160 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 GNMTQ14749 295 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 USF2Q15853 346 aaPredicted RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 C17orf82Q86X59 251 aaPredicted RBP8.56□□□□□ -1.04
CMC1-209ENST00000477739 ZNF695Q8IW36 515 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 PLPP5Q8NEB5 264 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 OR52M1Q8NGK5 317 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 FAM206AQ9NX38 181 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 GHRLQ9UBU3 117 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 LPAR3Q9UBY5 353 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 ST3GAL6Q9Y274 331 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 SIT1Q9Y3P8 196 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 CFAP47Q6ZTR5 3102 aa8.56□□□□□ -1.04
CMC1-209ENST00000477739 LIPT2A6NK58 231 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 PATE3B3GLJ2 98 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 KLK3P07288 261 aaPredicted RBP8.55□□□□□ -1.04
CMC1-209ENST00000477739 PET100P0DJ07 73 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 CCL4P13236 92 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 GLP1RP43220 463 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 SUMF2Q8NBJ7 301 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 OR2G3Q8NGZ4 309 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 RNF133Q8WVZ7 376 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 OIT3Q8WWZ8 545 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 TMEM230Q96A57 120 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 CALHM2Q9HA72 323 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 IGKV1-9A0A0C4DH69 117 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 SELEP16581 610 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
CMC1-209ENST00000477739 KMT5CQ86Y97 462 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 RBMXL1Q96E39 390 aaKnown RBP8.55□□□□□ -1.04
CMC1-209ENST00000477739 WBP1Q96G27 269 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 C2orf50Q96LR7 162 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 SLCO5A1Q9H2Y9 848 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 GTF3C1Q12789 2109 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 ARPC4-TTLL3A0A0A6YYG9 625 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 HSPB2A8KAH6 182 aa8.55□□□□□ -1.04
CMC1-209ENST00000477739 CCL3P10147 92 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms