RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 OSR2Q8N2R0 312 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 DUSP18Q8NEJ0 188 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 OR8S1Q8NH09 359 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RADILQ96JH8 1075 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 DUSP13Q9UII6 198 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 POU2F3Q9UKI9 436 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 FUOMA2VDF0 154 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 SULT1C2O00338 296 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 SCGNO76038 276 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 LPLP06858 475 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 PTAFRP25105 342 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 MPZP25189 248 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 DYRK1AQ13627 763 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 OR8G1Q15617 311 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 ST3GAL2Q16842 350 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 PLA1AQ53H76 456 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 FAAP20Q6NZ36 180 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 TMEM108Q6UXF1 575 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 LINC01560Q8TB33 94 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 RNASE6Q93091 150 aaKnown RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 PECRQ9BY49 303 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 COQ3Q9NZJ6 369 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
COL4A6-206ENST00000477085 ERRFI1Q9UJM3 462 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-206ENST00000477085 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 F5H5P2 479 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ABCD4O14678 606 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 PPP3CBP16298 524 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 CPT2P23786 658 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 BCAP31P51572 246 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 TFF3Q07654 80 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 IL24Q13007 206 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF154Q13106 437 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ELP2Q6IA86 826 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF573Q86YE8 665 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ST8SIA4Q92187 359 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 BBC3Q96PG8 261 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-206ENST00000477085 MICU1Q9BPX6 476 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 SYT3Q9BQG1 590 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
COL4A6-206ENST00000477085 SCPEP1Q9HB40 452 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 CADP27708 2225 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 CCR6P51684 374 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-206ENST00000477085 PCGF3Q3KNV8 242 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 SFRP4Q6FHJ7 346 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-206ENST00000477085 MZT2BQ6NZ67 158 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 BRICD5Q6PL45 260 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF554Q86TJ5 538 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 MKXQ8IYA7 352 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 NUP37Q8NFH4 326 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 MRPS24Q96EL2 167 aaKnown RBP12.28□□□□□ -0.44
COL4A6-206ENST00000477085 PKIBQ9C010 78 aa12.28□□□□□ -0.44
COL4A6-206ENST00000477085 HEATR1Q9H583 2144 aaKnown RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 LRP5LA4QPB2 252 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 ZSCAN5BA6NJL1 495 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 CDIPTO14735 213 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 AKR7A2O43488 359 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 ECDO95905 644 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 GRPP07492 148 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 GSTP1P09211 210 aaKnown RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 GIFP27352 417 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 RBM11P57052 281 aaKnown RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 TLE1Q04724 770 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 FAM189A2Q15884 450 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 SPRNQ5BIV9 151 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 DMRTC2Q8IXT2 367 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 UPRTQ96BW1 309 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 CA10Q9NS85 328 aa12.27□□□□□ -0.45
COL4A6-206ENST00000477085 NOP16Q9Y3C1 178 aaKnown RBP12.27□□□□□ -0.45
COL4A6-206ENST00000477085 A0A0B4J293 547 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 A0A1B0GUH1 482 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 J3QT63 122 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 CD3DP04234 171 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 GSTT2BP0CG30 244 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 CHATP28329 748 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 FGF12P61328 243 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 MPPED2Q15777 294 aa12.26□□□□□ -0.45
COL4A6-206ENST00000477085 CADM3Q8N126 398 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms