RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ST8SIA4Q92187 359 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 PGLYRP3Q96LB9 341 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 NUDT16L1Q9BRJ7 211 aaKnown RBP10.29□□□□□ -0.76
APTX-220ENST00000476858 HES4Q9HCC6 221 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 CNOT2Q9NZN8 540 aaKnown RBP10.29□□□□□ -0.76
APTX-220ENST00000476858 KAAG1Q9UBP8 84 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 DNAJB11Q9UBS4 358 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 OR5V1Q9UGF6 321 aa10.29□□□□□ -0.76
APTX-220ENST00000476858 LSM2Q9Y333 95 aaKnown RBP10.29□□□□□ -0.76
APTX-220ENST00000476858 PPIAL4CA0A0B4J2A2 164 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 KIR2DS1A0A191URI9 304 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 A0A1W2PPK0 400 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
APTX-220ENST00000476858 RFPL4AA6NLU0 287 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 TMEM212A6NML5 194 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 RFPL4AL1F8VTS6 287 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 MYL12AP19105 171 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 BCL3P20749 454 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 GABRA2P47869 451 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 POU3F4P49335 361 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 SLC35A2P78381 396 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 IRF3Q14653 427 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 ATPAF1Q5TC12 328 aaPredicted RBP10.28□□□□□ -0.76
APTX-220ENST00000476858 RPL22L1Q6P5R6 122 aaKnown RBP10.28□□□□□ -0.76
APTX-220ENST00000476858 UTS2BQ765I0 119 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 NLRC3Q7RTR2 1065 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 ZNF573Q86YE8 665 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 STX19Q8N4C7 294 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 NANOGP1Q8N7R0 232 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 TSEN15Q8WW01 171 aaKnown RBP10.28□□□□□ -0.76
APTX-220ENST00000476858 GHSRQ92847 366 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 TMIGD2Q96BF3 282 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 CYYR1Q96J86 154 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 RBFOX1Q9NWB1 397 aaKnown RBP10.28□□□□□ -0.76
APTX-220ENST00000476858 LPAR3Q9UBY5 353 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 WNK2Q9Y3S1 2297 aa10.28□□□□□ -0.76
APTX-220ENST00000476858 TRAV8-7A0A075B6U6 113 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 PIN1P1O15428 100 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 RRP9O43818 475 aaKnown RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 ACAA1P09110 424 aaPredicted RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 CCDC159P0C7I6 412 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 MMP9P14780 707 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 DUSP1P28562 367 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 MAP2K4P45985 399 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 FUT6P51993 359 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 SNU13P55769 128 aaKnown RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 MTCP1P56278 107 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ERVFRD-1P60508 538 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 FGF12P61328 243 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 IL24Q13007 206 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ZNF529Q6P280 563 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 TMPRSS11AQ6ZMR5 421 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 PARP16Q8N5Y8 322 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ZNF671Q8TAW3 534 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 PP6455Q8WZ26 134 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 SMIM19Q96E16 107 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 BORCS8Q96FH0 119 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 MRPL48Q96GC5 212 aaKnown RBP10.27□□□□□ -0.77
APTX-220ENST00000476858 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 PKIBQ9C010 78 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 DUSP21Q9H596 190 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ZCCHC4Q9H5U6 513 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 ZNF69Q9UC07 566 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 OR14J1Q9UGF5 321 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 AUP1Q9Y679 476 aa10.27□□□□□ -0.77
APTX-220ENST00000476858 TRBV5-5A0A0J9YX44 114 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 MDFIC2A0A1B0GVS7 189 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 IRGMA1A4Y4 181 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 J3QLI3 93 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 SIGLEC5O15389 551 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 GATBO75879 557 aaKnown RBP10.26□□□□□ -0.77
APTX-220ENST00000476858 NXPH2O95156 264 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 VENTXO95231 258 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 HNF1AP20823 631 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 EPHA1P21709 976 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 CRHBPP24387 322 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 PRDX2P32119 198 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 VHLP40337 213 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 GP2P55259 537 aaKnown RBP10.26□□□□□ -0.77
APTX-220ENST00000476858 ZP1P60852 638 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 ARF6P62330 175 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 PDCD1Q15116 288 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 CNN3Q15417 329 aaKnown RBP10.26□□□□□ -0.77
APTX-220ENST00000476858 CCDC58Q4VC31 144 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 RUSC1-AS1Q66K80 236 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 METAP1DQ6UB28 335 aaPredicted RBP10.26□□□□□ -0.77
APTX-220ENST00000476858 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 LY6G5BQ8NDX9 201 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 CCDC54Q8NEL0 328 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 OR52N4Q8NGI2 321 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 ITFG2Q969R8 447 aa10.26□□□□□ -0.77
APTX-220ENST00000476858 C12orf43Q96C57 262 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms