RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 IFNGP01579 166 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 HAAOP46952 286 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 HMGA2P52926 109 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 RPL23AP62750 156 aaKnown RBP13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 TRPM8Q7Z2W7 1104 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR2W3Q7Z3T1 314 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 RNF148Q8N7C7 305 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF714Q96N38 554 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 NIPAL2Q9H841 368 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 HES4Q9HCC6 221 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 SLC22A13Q9Y226 551 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 LYVE1Q9Y5Y7 322 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 SESN1Q9Y6P5 492 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 A0A0U1RQV5 110 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 PSMB11A5LHX3 300 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF737O75373 536 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR2F2O95006 317 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF3P17036 446 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 HTR1DP28221 377 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 MYCNOSP40205 109 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 IL18R1Q13478 541 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF573Q86YE8 665 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR4P4Q8NGL7 312 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 STMN2Q93045 179 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 OTULINQ96BN8 352 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 P2RX4Q99571 388 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 CLEC7AQ9BXN2 247 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 TMEM133Q9H2Q1 129 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 IL1RAPQ9NPH3 570 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 CMC2Q9NRP2 79 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 TAS2R1Q9NYW7 299 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 POLDIP2Q9Y2S7 368 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 KLHDC2Q9Y2U9 406 aa13.05□□□□□ -0.32
APOBEC3F-203ENST00000476513 SELENOFO60613 162 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 DNAJC8O75937 253 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 KRT36O76013 467 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 ATP6V1B1P15313 513 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 BRS3P32247 399 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 DOC2BQ14184 412 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF684Q5T5D7 378 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 GDPD3Q7L5L3 318 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 ZNF329Q86UD4 541 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 COMMD2Q86X83 199 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 ITFG2Q969R8 447 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 PRR25Q96S07 402 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 SPAG4Q9NPE6 437 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 PIGLQ9Y2B2 252 aa13.04□□□□□ -0.32
APOBEC3F-203ENST00000476513 DNAH1Q9P2D7 4330 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 LCE6AA0A183 80 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 NUDT19A8MXV4 375 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 GSC2O15499 205 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 NRASP01111 189 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 ERVK11-1P61568 191 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR8H2Q8N162 312 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 AQP11Q8NBQ7 271 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR51E1Q8TCB6 317 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 OR51V1Q9H2C8 321 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 FAM206AQ9NX38 181 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
APOBEC3F-203ENST00000476513 HUWE1Q7Z6Z7 4374 aaKnown RBP13.02□□□□□ -0.32
APOBEC3F-203ENST00000476513 hADV38S2A0JD32 116 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 PQLC2LA1A4F0 135 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 MMP23AO75900 390 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 CCNB2O95067 398 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 IGLV3-1P01715 115 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 MPZP25189 248 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 SLC6A1P30531 599 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 EDDM3AQ14507 147 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 KCTD18Q6PI47 426 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 TEAD3Q99594 435 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 GPR84Q9NQS5 396 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 MAGEL2Q9UJ55 1249 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 HHLA2Q9UM44 414 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 LINC00312Q9Y6C7 94 aa13.02□□□□□ -0.33
APOBEC3F-203ENST00000476513 TMEM82A0PJX8 343 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 LUMP51884 338 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 PLBD1Q6P4A8 553 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 BAIAP2L2Q6UXY1 529 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 ASRGL1Q7L266 308 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 KRT77Q7Z794 578 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
APOBEC3F-203ENST00000476513 TPRX1Q8N7U7 411 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms