RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 TMIGD2Q96BF3 282 aa15.15■□□□□ 0.02
SNRPB-203ENST00000474384 RAB39BQ96DA2 213 aa15.15■□□□□ 0.02
SNRPB-203ENST00000474384 GPER1Q99527 375 aa15.15■□□□□ 0.02
SNRPB-203ENST00000474384 NKX3-1Q99801 234 aaPredicted RBP15.15■□□□□ 0.02
SNRPB-203ENST00000474384 NRIP2Q9BQI9 281 aa15.15■□□□□ 0.02
SNRPB-203ENST00000474384 RASL12Q9NYN1 266 aa15.15■□□□□ 0.02
SNRPB-203ENST00000474384 GABRPO00591 440 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 NXPH2O95156 264 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 LY6G6DO95868 133 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 CYB5AP00167 134 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 WNT2P09544 360 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 UCHL1P09936 223 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 TMEM225BP0DP42 221 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 RPS2P15880 293 aaKnown RBP15.14■□□□□ 0.01
SNRPB-203ENST00000474384 GZMKP49863 264 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 ZP1P60852 638 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 ERVK11-1P61568 191 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 SEC61A1P61619 476 aaKnown RBP15.14■□□□□ 0.01
SNRPB-203ENST00000474384 KRTAP1-1Q07627 177 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 HSD17B12Q53GQ0 312 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 CYB5R2Q6BCY4 276 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 ACP7Q6ZNF0 438 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 MUL1Q969V5 352 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 MSI2Q96DH6 328 aaKnown RBP15.14■□□□□ 0.01
SNRPB-203ENST00000474384 CPNE2Q96FN4 548 aaPredicted RBP15.14■□□□□ 0.01
SNRPB-203ENST00000474384 C1orf159Q96HA4 380 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 CEP19Q96LK0 163 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 GSX1Q9H4S2 264 aaPredicted RBP15.14■□□□□ 0.01
SNRPB-203ENST00000474384 NLKQ9UBE8 527 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 MIOXQ9UGB7 285 aa15.14■□□□□ 0.01
SNRPB-203ENST00000474384 IGKV1-12A0A0C4DH73 117 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 TRIM64CA6NLI5 447 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 F5H0A9 414 aaPredicted RBP15.13■□□□□ 0.01
SNRPB-203ENST00000474384 TRAPPC2LH3BP13 241 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 ADAM20O43506 726 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 NDUFA2O43678 99 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 IGKV1D-12P01611 117 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 TFF1P04155 84 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 SRMP19623 302 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 BCL3P20749 454 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 ZNF93P35789 620 aaPredicted RBP15.13■□□□□ 0.01
SNRPB-203ENST00000474384 NPBWR2P48146 333 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 STUMQ69YW2 141 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 BIVMQ86UB2 503 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 TNFAIP8L1Q8WVP5 186 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 C12orf43Q96C57 262 aaKnown RBP15.13■□□□□ 0.01
SNRPB-203ENST00000474384 NEIL1Q96FI4 390 aaPredicted RBP15.13■□□□□ 0.01
SNRPB-203ENST00000474384 CCL13Q99616 98 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 LPAR2Q9HBW0 351 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 HES4Q9HCC6 221 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 TCF7L1Q9HCS4 588 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 VCX3AQ9NNX9 186 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 ABCA2Q9BZC7 2435 aa15.13■□□□□ 0.01
SNRPB-203ENST00000474384 OR2AT4A6NND4 320 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 CALCBP10092 127 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 PSG2P11465 335 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 AMY2BP19961 511 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 SMIM21Q3B7S5 101 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 CD200R1LQ6Q8B3 271 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 CLEC9AQ6UXN8 241 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 C1QL2Q7Z5L3 287 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 LINC01356Q8N9X3 169 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 OR8B3Q8NGG8 313 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 ANGPTL6Q8NI99 470 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 PHYHIPQ92561 330 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 OR8B2Q96RD0 313 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 FAM192AQ9GZU8 254 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 SMURF1Q9HCE7 757 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
SNRPB-203ENST00000474384 CTSZQ9UBR2 303 aa15.12■□□□□ 0.01
SNRPB-203ENST00000474384 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 IGKV1D-17A0A075B6S4 117 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 A0A1B0GW55 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 TRDV1A0A1B0GX56 115 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 B4DSR2 109 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 TMPRSS2O15393 492 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 ARL6IP5O75915 188 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L2P0CJ85 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L3P0CJ86 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L4P0CJ87 422 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L5P0CJ88 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L6P0CJ89 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L7P0CJ90 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 SMIM18P0DKX4 95 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 ZNF16P17020 682 aaPredicted RBP15.11■□□□□ 0.01
SNRPB-203ENST00000474384 ADRA2CP18825 462 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 PTGFRP43088 359 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 GABRA2P47869 451 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 OR3A4PP47883 348 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4L9Q6RFH8 374 aaPredicted RBP15.11■□□□□ 0.01
SNRPB-203ENST00000474384 NLRC3Q7RTR2 1065 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 LRRTM1Q86UE6 522 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 SAXO1Q8IYX7 474 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 JAGN1Q8N5M9 183 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 ZSCAN4Q8NAM6 433 aaPredicted RBP15.11■□□□□ 0.01
SNRPB-203ENST00000474384 EMG1Q92979 244 aaKnown RBP15.11■□□□□ 0.01
SNRPB-203ENST00000474384 DUX4Q9UBX2 424 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 ABCA1O95477 2261 aa15.11■□□□□ 0.01
SNRPB-203ENST00000474384 MEGF11A6BM72 1044 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 RFPL4AA6NLU0 287 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms