RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 EMG1Q92979 244 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM45BQ96B21 275 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 REEP6Q96HR9 211 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 CHST6Q9GZX3 395 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LPAR5Q9H1C0 372 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ARRDC1-AS1Q9H2J1 176 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PPA2Q9H2U2 334 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 BANF2Q9H503 90 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 OPA3Q9H6K4 179 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 AKIRIN1Q9H9L7 192 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 CRLF2Q9HC73 371 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF701Q9NV72 531 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PLEKHJ1Q9NW61 149 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 RDH8Q9NYR8 311 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PIPOXQ9P0Z9 390 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LRFN1Q9P244 771 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 SHPKQ9UHJ6 478 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 NUP50Q9UKX7 468 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 NOSIPQ9Y314 301 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 EXPH5Q8NEV8 1989 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PCDH15Q96QU1 1955 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 CACNA1EQ15878 2313 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 XIRP2A4UGR9 3374 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ANKRD11Q6UB99 2663 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 EML5Q05BV3 1969 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SEC16AO15027 2179 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RP1P56715 2156 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 LOC100509620A0A075B734 347 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 PIGBOS1A0A0B4J2F0 54 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 C13orf42A0A1B0GVH6 325 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 hCG_1807616A0A1W2PRN6 198 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 C9orf170A2RU37 121 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5H15A6NDH6 313 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5H14A6NHG9 310 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR2AT4A6NND4 320 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 LEUTXA8MZ59 168 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 KLRC4-KLRK1H3BQV0 150 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 MFNGO00587 321 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 CYTIPO60759 359 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RAMP1O60894 148 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RAD51DO75771 328 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SIX6O95475 246 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 IFNA21P01568 189 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 CD8AP01732 235 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF735P0CB33 412 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SP9P0CG40 484 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC25A4P12235 298 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 B4GALT1P15291 398 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RBMXP38159 391 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 GLP1RP43220 463 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SNU13P55769 128 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 CLDN15P56746 228 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 H2BFSP57053 126 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SRSF4Q08170 494 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 PPP1R1AQ13522 171 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 HLXQ14774 488 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RNPS1Q15287 305 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 CEACAM16Q2WEN9 425 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ABCA11PQ4W5N1 156 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 NSUN5P2Q63ZY6 315 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 EIF5AL1Q6IS14 154 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 C11orf87Q6NUJ2 197 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 Q6ZSR3 168 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ACOT7LQ6ZUV0 252 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 HOGA1Q86XE5 327 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF100Q8IYN0 542 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 PAQR4Q8N4S7 273 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM185AQ8NFB2 350 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR4S1Q8NGB4 309 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR6K3Q8NGY3 331 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SUN5Q8TC36 379 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 NPRL2Q8WTW4 380 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 PIGTQ969N2 578 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 NABP1Q96AH0 204 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 APH1AQ96BI3 265 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 CMBLQ96DG6 245 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 MRPS24Q96EL2 167 aaKnown RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 PHYHIPLQ96FC7 376 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 HIST1H2AAQ96QV6 131 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 GPHA2Q96T91 129 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 NKX3-1Q99801 234 aaPredicted RBP5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ST6GALNAC5Q9BVH7 336 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 TM2D1Q9BX74 207 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SRXN1Q9BYN0 137 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 LINC00470Q9BZP3 86 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 OR2H1Q9GZK4 316 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC25A32Q9H2D1 315 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 HEXA-AS1Q9H8Q6 139 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 BCO1Q9HAY6 547 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 GPR35Q9HC97 309 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 RAB18Q9NP72 206 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ZC4H2Q9NQZ6 224 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ZFP57Q9NU63 452 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 MED9Q9NWA0 146 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 EHFQ9NZC4 300 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF224Q9NZL3 707 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 ANAPC10Q9UM13 185 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 VSIG4Q9Y279 399 aa5.11□□□□□ -1.59
ATPAF1-204ENST00000474020 KCNK7Q9Y2U2 307 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms