RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 BCAP31P51572 246 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 LAMTOR4Q0VGL1 99 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 TRDNQ13061 729 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 MRPL2Q5T653 305 aaKnown RBP2.34□□□□□ -2.03
CLK1-209ENST00000472679 KCTD16Q68DU8 428 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 SLC35D2Q76EJ3 337 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 LY6G5BQ8NDX9 201 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 OR4K2Q8NGD2 314 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 MRPL20Q9BYC9 149 aaKnown RBP2.34□□□□□ -2.03
CLK1-209ENST00000472679 PORCNQ9H237 461 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 CHRAC1Q9NRG0 131 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 PEF1Q9UBV8 284 aaKnown RBP2.34□□□□□ -2.03
CLK1-209ENST00000472679 PSME2Q9UL46 239 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 MMACHCQ9Y4U1 282 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 NEURL4Q96JN8 1562 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 MYO16Q9Y6X6 1858 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 CENPXA8MT69 81 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 IGLL5B9A064 214 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 ZNF878C9JN71 531 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 J3QRE1 110 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 CASC3O15234 703 aaKnown RBP2.33□□□□□ -2.04
CLK1-209ENST00000472679 ENTPD6O75354 484 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 SFTPCP11686 197 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 SLC6A1P30531 599 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 RPL10AP62906 217 aaKnown RBP2.33□□□□□ -2.04
CLK1-209ENST00000472679 THOC7Q6I9Y2 204 aaKnown RBP2.33□□□□□ -2.04
CLK1-209ENST00000472679 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 KIAA1143Q96AT1 154 aaPredicted RBP2.33□□□□□ -2.04
CLK1-209ENST00000472679 PPP1R36Q96LQ0 422 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 RGCCQ9H4X1 137 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 CYP3A43Q9HB55 503 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 SSH2Q76I76 1423 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 TMEM131Q92545 1883 aa2.33□□□□□ -2.04
CLK1-209ENST00000472679 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 A0A1W2PRF3 423 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 A0A1W2PRM7 423 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 C3orf84H3BNL1 204 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 UPK1AO00322 258 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 AQP9O43315 295 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 IGHMP01871 453 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 SRMP19623 302 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 CD9P21926 228 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 PEX19P40855 299 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 FOXA1P55317 472 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 SLC35B1P78383 322 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 ELOCQ15369 112 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 FAM231DQ6ZW35 169 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 PAGE2Q7Z2X7 111 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 FBXO36Q8NEA4 188 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 ZNF555Q8NEP9 628 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 OR5T3Q8NGG3 340 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 OR5H2Q8NGV7 314 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 OR6K6Q8NGW6 343 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 OR51A7Q8NH64 312 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 ZFAND1Q8TCF1 268 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 THTPAQ9BU02 230 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 TMED9Q9BVK6 235 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 IL22Q9GZX6 179 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 TFR2Q9UP52 801 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 KPTNQ9Y664 436 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 PLXNB3Q9ULL4 1909 aa2.32□□□□□ -2.04
CLK1-209ENST00000472679 GOLGA6L7A0A1B0GV03 622 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 FAM240AA0A1B0GVK7 77 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 E7EQL1 145 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 CDK1P06493 297 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 PRPS1L1P21108 318 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 IVDP26440 423 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 DOC2AQ14183 400 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 CDNFQ49AH0 187 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 CLEC19AQ6UXS0 136 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 CYP4Z2PQ8N1L4 340 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 NDNFQ8TB73 568 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 SMIM8Q96KF7 97 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 KIR3DX1Q9H7L2 352 aa2.31□□□□□ -2.04
CLK1-209ENST00000472679 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 ISLRO14498 428 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 PLEKHA8P1O95397 391 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 TRGV3P03979 118 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 RHOCP08134 193 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 CCT6AP40227 531 aaKnown RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 GZMMP51124 257 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 RPL31P62899 125 aaKnown RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 IFFO1Q0D2I5 559 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 ATP6V1FQ16864 119 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 CLEC18BQ6UXF7 455 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 SETD3Q86TU7 594 aaPredicted RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 ZNF75AQ96N20 296 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 TSNAXQ99598 290 aaKnown RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 CHID1Q9BWS9 393 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 ASB7Q9H672 318 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 C6orf50Q9HD87 102 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 DDIT4Q9NX09 232 aa2.3□□□□□ -2.04
CLK1-209ENST00000472679 RABL2AQ9UBK7 228 aaPredicted RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 MCTS1Q9ULC4 181 aaKnown RBP2.3□□□□□ -2.04
CLK1-209ENST00000472679 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 954 ms