RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RIDAP52758 137 aaKnown RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 ESRRGP62508 458 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 COL10A1Q03692 680 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 BNIP1Q12981 228 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 GK3PQ14409 553 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 ATP6AP1Q15904 470 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 DHRS7BQ6IAN0 325 aaPredicted RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 KCTD18Q6PI47 426 aaPredicted RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 DEGS2Q6QHC5 323 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 CATSPERDQ86XM0 798 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 CMTM4Q8IZR5 234 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 POC1AQ8NBT0 407 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 BEND2Q8NDZ0 799 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 OR52N4Q8NGI2 321 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 OR10AC1Q8NH08 325 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 OR5K1Q8NHB7 308 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 BCAS4Q8TDM0 211 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 CNN2Q99439 309 aaKnown RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 CIB1Q99828 191 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 DNTTIP1Q9H147 329 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 METTL8Q9H825 291 aaKnown RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 KIF17Q9P2E2 1029 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 ENPP5Q9UJA9 477 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 R4GMQ9 66 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 RYR3Q15413 4870 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 IGKV1-9A0A0C4DH69 117 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 A0A1B0GUS0 222 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 ANKRD61A6NGH8 418 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 NKX6-3A6NJ46 265 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 SAC3D1A6NKF1 404 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 SLC22A31A6NKX4 558 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 LOC110117498-PIK3R3F6TDL0 507 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 NOS1APO75052 506 aaPredicted RBP6.53□□□□□ -1.36
USP48-207ENST00000471752 ZNF737O75373 536 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 IGHA1P01876 353 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 TK1P04183 234 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 CD24P25063 80 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 GDNFP39905 211 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 EFNB2P52799 333 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 NANOS3P60323 173 aaKnown RBP6.53□□□□□ -1.36
USP48-207ENST00000471752 RPL31P62899 125 aaKnown RBP6.53□□□□□ -1.36
USP48-207ENST00000471752 ZNF85Q03923 595 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 C11orf91Q3C1V1 193 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 TMEM95Q3KNT9 176 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 TP53I3Q53FA7 332 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 CLVS2Q5SYC1 327 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 BCL2L15Q5TBC7 163 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 GDPGP1Q6ZNW5 385 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 Q6ZSR3 168 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 YIPF7Q8N8F6 280 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 ZNF671Q8TAW3 534 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 EME1Q96AY2 570 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 RBMXL1Q96E39 390 aaKnown RBP6.53□□□□□ -1.36
USP48-207ENST00000471752 ADAT3Q96EY9 351 aaPredicted RBP6.53□□□□□ -1.36
USP48-207ENST00000471752 NRBF2Q96F24 287 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 DPAGT1Q9H3H5 408 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 CLN6Q9NWW5 311 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
USP48-207ENST00000471752 IGKV1-12A0A0C4DH73 117 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 OR5B21A6NL26 309 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 ADARB2-AS1A8MUL3 147 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 C17orf98A8MV24 154 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 G3V2T6 193 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 J3QT63 122 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 K7N7A8 449 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 M0QZ24 198 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 ZNF254O75437 659 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 NXPH2O95156 264 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 PAHP00439 452 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 IGKV1D-12P01611 117 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 CD28P10747 220 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 CCL1P22362 96 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 MPZP25189 248 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 GABRA5P31644 462 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 TGFBR2P37173 567 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 SNU13P55769 128 aaKnown RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 BLCAPP62952 87 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 ZNF829Q3KNS6 432 aaPredicted RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 DNAL1Q4LDG9 190 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 NXNL2Q5VZ03 156 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 FTMTQ8N4E7 242 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 OR10H4Q8NGA5 316 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 OR51A4Q8NGJ6 313 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 ASB17Q8WXJ9 295 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 RFT1Q96AA3 541 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 CYYR1Q96J86 154 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 SPACA5Q96QH8 159 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 OR5M11Q96RB7 305 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 CHST6Q9GZX3 395 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 MMP27Q9H306 513 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 RIBC2Q9H4K1 309 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 ZNF702PQ9H963 129 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms